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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00015.1.g06890.1.cf.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
BBR-BPC |
| Protein Properties |
Length: 340aa MW: 37683.8 Da PI: 10.5637 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00015.1.g06890.1.cf.mkhc | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 344.7 | 2.2e-105 | 1 | 340 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkgyyepaaslkenlglqlmssia.erdaki........rernlalsekkaavaerd............ 57
mdddgs rn+g+ye k nlglqlms +a +rd+k +++ + +++++++++rd
Zjn_sc00015.1.g06890.1.cf.mkhc 1 MDDDGSLGiRNWGFYETV---KGNLGLQLMSPVApDRDTKSllpnstflHHHGQ-HHQQQHSHQPRDfgagggasaamp 75
9*****999******988...**********9999******6655555422222.345555555666************ PP
GAGA_bind 58 .......maflqrdkalaernkalverdnkllalllvensla...........salpvgvqvlsgtksidslqq..lse 116
m+f++++++l+ ++ +++k+l+ ++ + ++p+++q++++++++ ++ q
Zjn_sc00015.1.g06890.1.cf.mkhc 76 teprpvhMDFTRNEAWLHP-SQHQRAHEQKILHFGPAGHVGHpghavhpghvvRHHPASYQMMPDARHALQMMQppE-A 152
*******************.8888899999**9999998877888999**999999*******99988655544232.1 PP
GAGA_bind 117 .....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskae 190
pql+++ + +ee ++ + e ++ +++++ +kkrq ++pk++k kk+kk +++++ ++++ +r++ +
Zjn_sc00015.1.g06890.1.cf.mkhc 153 qsqpqPQLQPQEHPPCKEE-GASPALAEDHSMVRNEQPVKKRQLRRQPKSPKPKKPKK-AVVPREDGAPNRPAPRARGP 229
3566677887777744444.455666777788888888899*****************.67888888888877****** PP
GAGA_bind 191 kksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklL 269
kk +++v+ng+++D s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+L
Zjn_sc00015.1.g06890.1.cf.mkhc 230 KKAVGMVINGIDVDLSRIPTPVCSCTGSPQQCYRWGAGGWQSACCTTNISTYPLPMSTKRRGARIAGRKMSQGAFKKVL 308
******************************************************************************* PP
GAGA_bind 270 ekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
ekL++eGy+l+np+DLk++WAkHGtnkfvtir
Zjn_sc00015.1.g06890.1.cf.mkhc 309 EKLSGEGYNLNNPIDLKTFWAKHGTNKFVTIR 340
*******************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 340 aa
Download sequence Send
to blast |
MDDDGSLGIR NWGFYETVKG NLGLQLMSPV APDRDTKSLL PNSTFLHHHG QHHQQQHSHQ 60
PRDFGAGGGA SAAMPTEPRP VHMDFTRNEA WLHPSQHQRA HEQKILHFGP AGHVGHPGHA 120
VHPGHVVRHH PASYQMMPDA RHALQMMQPP EAQSQPQPQL QPQEHPPCKE EGASPALAED 180
HSMVRNEQPV KKRQLRRQPK SPKPKKPKKA VVPREDGAPN RPAPRARGPK KAVGMVINGI 240
DVDLSRIPTP VCSCTGSPQQ CYRWGAGGWQ SACCTTNIST YPLPMSTKRR GARIAGRKMS 300
QGAFKKVLEK LSGEGYNLNN PIDLKTFWAK HGTNKFVTIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Positively regulates the homeotic gene BKN3. {ECO:0000269|PubMed:12795701}. |
