PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00015.1.g03200.1.sm.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 480aa MW: 52505.3 Da PI: 10.3918

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00015.1.g03200.1.sm.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	90	2.7e-28	201	298	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsf 80 ++ r+ws eDe+++L++li f+ k+g + +d+ ++ +++++++ +++s++ql++KirrLK+K+k +ak+g+ep++ Zjn_sc00015.1.g03200.1.sm.mk 201 RAPRVWSHEDEVTILRALIAFRGKKGRlpASIQDTGKLESQIRGQLTANASTTQLSDKIRRLKHKYKLLAIRAKKGREPDL 281 5689*********************777888******************************************** PP DUF573 81 skehdqkifelskkiWg 97 ++hd++++el kk+Wg Zjn_sc00015.1.g03200.1.sm.mk 282 PTDHDREMYELGKKVWG 298 **************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	3.9E-26	203	298	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
MAPKRPAAAA ASGSASDALD AEADTGGHRR RRHSSSPVRS RSRSKTPPWT IRPNAAALSS 60 TPTSAGADYA AASDSDADGR VPSPRGRRER SRIPRSDSDV DAVGRIPAPL SSPRRSRDGS 120 PRFHSDSDPD NFGASEDGGE GNVSTLPRAR RSTRIETSNI KPVGSRLMGK PGRAAGASSS 180 QGGSKGRHRS PALPTAEHHK RAPRVWSHED EVTILRALIA FRGKKGRLPA SIQDTGKLES 240 QIRGQLTANA STTQLSDKIR RLKHKYKLLA IRAKKGREPD LPTDHDREMY ELGKKVWGYF 300 SIDGFVEVGG SQNARDEESN EDQEIEESDE GMESGWDVHD QPHDQPKKVK AFRFENGSRN 360 AIAANGNAFA TGGSSKASQG GGGGGKDVSE KRKQMYPYLW EAVEELSKDH PSGQIFRKAF 420 GVLEKAKAHA IEEKLRKFRM SEIRQQLRRM DLMKETVTME DLPRSDLLSA KTPDMELSYD

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

MAPKRPAAAA ASGSASDALD AEADTGGHRR RRHSSSPVRS RSRSKTPPWT IRPNAAALSS  60
TPTSAGADYA AASDSDADGR VPSPRGRRER SRIPRSDSDV DAVGRIPAPL SSPRRSRDGS  120
PRFHSDSDPD NFGASEDGGE GNVSTLPRAR RSTRIETSNI KPVGSRLMGK PGRAAGASSS  180
QGGSKGRHRS PALPTAEHHK RAPRVWSHED EVTILRALIA FRGKKGRLPA SIQDTGKLES  240
QIRGQLTANA STTQLSDKIR RLKHKYKLLA IRAKKGREPD LPTDHDREMY ELGKKVWGYF  300
SIDGFVEVGG SQNARDEESN EDQEIEESDE GMESGWDVHD QPHDQPKKVK AFRFENGSRN  360
AIAANGNAFA TGGSSKASQG GGGGGKDVSE KRKQMYPYLW EAVEELSKDH PSGQIFRKAF  420
GVLEKAKAHA IEEKLRKFRM SEIRQQLRRM DLMKETVTME DLPRSDLLSA KTPDMELSYD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012702606.1	1e-160	STOREKEEPER protein
TrEMBL	A0A0A9BR30	1e-169	A0A0A9BR30_ARUDO; Uncharacterized protein
STRING	Si013598m	1e-159	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2671	35	87

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	1e-12	DNA-binding storekeeper protein-related transcriptional regulator