PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00013.1.g00030.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 288aa    MW: 30526.9 Da    PI: 7.0442
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00013.1.g00030.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.41.3e-13178224455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    h  +ErrRR+ri ++f eL +++P +     kK++Ka+iL  A++Y+k+Lq
  Zjn_sc00013.1.g00030.1.am.mk 178 HHILAERRRRERIDQRFIELSTVIPGL-----KKMDKATILFDATRYVKELQ 224
                                   6999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.11174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.46E-5177228No hitNo description
Gene3DG3DSA:4.10.280.104.1E-16178236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-11178224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-16178240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.4E-14180229IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MEDSSLFMQW ALSILQHEHP PATPGGPGPA PRDGGDHSLS PLPELGLAVS GLSASMSSMV  60
PGEPPAREGS RATGSWSSGE TTHSGGESVT ALERDGWSPS QNSAVHAAPR SSGANQPVSW  120
NFSAASARPS KEAMRNSTAT DGGGGGGAPL MVQESLPTRR TTARRSGSTP SSAMYVQHHI  180
LAERRRRERI DQRFIELSTV IPGLKKMDKA TILFDATRYV KELQGKIKEH EDSRSNGHQN  240
VEYGAVLAKN KKPRITVPDD EDGAYVASVP AATSGALPEI AARISEEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182187ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025792499.13e-71transcription factor bHLH18-like
TrEMBLA0A0A9SBV51e-75A0A0A9SBV5_ARUDO; Uncharacterized protein
STRINGGRMZM2G095899_P011e-64(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4340923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-14bHLH family protein