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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00012.1.g07050.1.sm.mk |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
WRKY |
| Protein Properties |
Length: 526aa MW: 55873.5 Da PI: 6.5106 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00012.1.g07050.1.sm.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 103.8 | 9.3e-33 | 210 | 267 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK++kgse+prsYY+C++++Cp+kkkvers d++v+ei+Y+g+Hnh+k
Zjn_sc00012.1.g07050.1.sm.mk 210 DDGYNWRKYGQKQMKGSENPRSYYKCSFPDCPTKKKVERSP-DGQVTEIVYKGTHNHPK 267
8****************************************.***************85 PP
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| 2 | WRKY | 99 | 3e-31 | 374 | 432 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct agCpv+k+ver+ +d ++v++tY +Hnh+
Zjn_sc00012.1.g07050.1.sm.mk 374 LDDGYRWRKYGQKVVKGNPNPRSYYKCTAAGCPVRKHVERACHDARAVITTYVAKHNHD 432
59********************************************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MTSAPASLGA AVANSGPVAL SFASNSFGGG SSFLAGGSRF KNMAPASLLP ASPSSRFNAA 60
AAGGFLDSPI LLTPSLFPSP TTGAFPSEPF NWMGPPAENL PEVVKEEKRQ CFDFTFQTTA 120
AVPVTTTGAA QAESFSQSSM TMAPLGGEGD SYNGEPWSFQ QERAMDFNAP FEAPSSGVTT 180
AATQPADMLG NSGYNAPPCF REQQSRRSSD DGYNWRKYGQ KQMKGSENPR SYYKCSFPDC 240
PTKKKVERSP DGQVTEIVYK GTHNHPKPQG TRRGAASAAS YVLGSANDEH SFGALSGTPV 300
ATPENSSGSF GDDEINGVSS RLIGTDQLLH ADDEPDSKKC RRDGSEGEAL SVAGNRTVRE 360
PRVVVQTLSD IDVLDDGYRW RKYGQKVVKG NPNPRSYYKC TAAGCPVRKH VERACHDARA 420
VITTYVAKHN HDVPPARGSY RAGLTALQPA ASYHQGAGVF GGASSHGAPM QAAESGGFAV 480
SGFGNTMGAS YPYTTSQQCD ATYYTSGTKD EPRDDDLSFF EQQLLF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | DQ298184 | 2e-98 | DQ298184.1 Oryza sativa (japonica cultivar-group) WRKY transcription factor 70 mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
Plant Mol. Biol., 2009. 70(1-2): p. 139-51
[PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
Biomed Res Int, 2014. 2014: p. 706890
[PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
Plant Sci., 2015. 236: p. 214-22
[PMID:26025535]
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