 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zjn_sc00012.1.g00550.1.sm.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
bHLH |
| Protein Properties |
Length: 215aa MW: 23783.1 Da PI: 6.8086 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00012.1.g00550.1.sm.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 28 | 4e-09 | 180 | 208 | 1 | 29 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPk 29
+rr+h ++Er+RR+++N+ + Lr+l+P
Zjn_sc00012.1.g00550.1.sm.mk 180 QRRTHIAVERNRRRQMNEYLRILRSLMPG 208
79**************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 215 aa
Download sequence Send
to blast |
MSAIKRMDKQ KATTTHSHLD SFAPEEEHSA ESGGGAEMVD YMLSQADHPA SQPTEGQSHQ 60
QVSFDKLRFS DVLEFADFGP KLAINQVDGG EDDDGYLFRF QPLPSLPAAP PRGDAAGQQH 120
HHVEQQEGSK KTADGGISDS TTLVEQADGG GREEKGGGQG KSGRRKRPRT VKTSEEVESQ 180
RRTHIAVERN RRRQMNEYLR ILRSLMPGSY VQRAR
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 149 | 157 | GGREEKGGG |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ727750 | 6e-62 | KJ727750.1 Zea mays clone pUT5691 bHLH transcription factor (bHLH22) mRNA, partial cds. |
