PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00011.1.g06750.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 499aa    MW: 51914 Da    PI: 7.5486
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00011.1.g06750.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.2e-30243302159
                                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed++++++tYeg+Hnh+
  Zjn_sc00011.1.g06750.1.sm.mkhc 243 MNDGCQWRKYGQKISKGNPCPRAYYRCTVApNCPVRKQVQRCAEDKTILITTYEGTHNHQ 302
                                     58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-31230304IPR003657WRKY domain
SuperFamilySSF1182904.97E-27236304IPR003657WRKY domain
PROSITE profilePS5081127.864238304IPR003657WRKY domain
SMARTSM007744.3E-35243303IPR003657WRKY domain
PfamPF031064.8E-26244302IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    Send to blast
MEVAVERLPV KEEKRADDRP EIVAIGSALP IVFESFQSPQ RAASIKLQED SNRLEAARAE  60
MGEVKEENER LKTLLSRIVS DYQSLRMHYL DVVKVREQSG KAKLPAEPAP VADVDDLVSL  120
SLGTRSNGGA RPKGHERSSS SSGTADDSQL SLGLGFGRGN GPSTDDDKAS GASAGPVLNL  180
SSGSSSAEDT TKISEADASR PGETRKSPSA GAGAGDGSAD DEVQQQAKRI RVSVRVKCDT  240
PTMNDGCQWR KYGQKISKGN PCPRAYYRCT VAPNCPVRKQ VQRCAEDKTI LITTYEGTHN  300
HQLPPAATAM AYTTSAAAAM LTTGSTSSTP AASLAHHHLP FATPAGLLGP TTMVSTAASC  360
PTITLDLTAP ATPAHALMES SPYAAGAYES KALPAAWSSG LPAYGGNLLS YYAAKSSPAM  420
GNLFGGLGLP SRPDHLFGQS SFLQRSTSLG GGQSAVAPVV TDTLAKAITS DPSFQSALAA  480
MITSYMGRGA GSGGESAHK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-22231306276WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002457211.10.0probable WRKY transcription factor 72
TrEMBLA0A3L6SPC50.0A0A3L6SPC5_PANMI; Putative WRKY transcription factor 72
STRINGSb03g003370.10.0(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP120812938
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.16e-63WRKY DNA-binding protein 72