 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00011.1.g06470.1.am.mk |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
C2H2 |
| Protein Properties |
Length: 175aa MW: 18780.2 Da PI: 5.9254 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00011.1.g06470.1.am.mk | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 15.6 | 4.7e-05 | 68 | 90 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++C++ F ++ L H++ H
Zjn_sc00011.1.g06470.1.am.mk 68 FVCTYCDRKFCSSQALGGHQNAH 90
89******************988 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MSDSFDATSA NERHCSMAAR ALEFALQPSA VQEQVGMCDT ASAIMEEEEL NLELTLLHRS 60
PAEPFGFFVC TYCDRKFCSS QALGGHQNAH KYERSLAKRR REIAAAMRAH APAAATGNLD 120
AGVVVAAAGN QRVRSDAKQH AAVAPLPALL MTSNKEMPSE SSIDCGDGLD LSLRL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU963282 | 1e-40 | EU963282.1 Zea mays clone 260368 hypothetical protein mRNA, complete cds. |
| GenBank | EU972402 | 1e-40 | EU972402.1 Zea mays clone 380740 zinc finger protein 3 mRNA, complete cds. |
| GenBank | EU973130 | 1e-40 | EU973130.1 Zea mays clone 393764 zinc finger protein 3 mRNA, complete cds. |
