PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00011.1.g03440.1.sm.mkhc
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 304aa    MW: 32981.2 Da    PI: 4.7115
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00011.1.g03440.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.7e-3087145259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                      D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+ eHnh 
  Zjn_sc00011.1.g03440.1.sm.mkhc  87 ADSWTWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPTMLLVTYTFEHNHA 145
                                     69*************************998****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-3183147IPR003657WRKY domain
SuperFamilySSF1182906.54E-2685147IPR003657WRKY domain
SMARTSM007745.7E-3786146IPR003657WRKY domain
PfamPF031063.0E-2688144IPR003657WRKY domain
PROSITE profilePS5081131.50288147IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MSSAEDGYCS ADSPRADSGD EQLAAAEESP RTVAGQNKRE RDIPSPSSPL PAAKRSRRSV  60
EKRVVSVRIG EGGDRAKGAS GEGPPPADSW TWRKYGQKPI KGSPYPRGYY RCSSSKGCPA  120
RKQVERSRAD PTMLLVTYTF EHNHASPQPK SSGCHQSKQS PRTSAPKSEP PEPEVEQAER  180
PETGTEHEAA EAPEPEVPEP EQEQKVAVTL VEPAEATTGP PAAAEEDESF DFGWFDQYPT  240
WHRTALYAST PALDTAPLLP PEEWERELQG EDALFAGLGE LPECAVVFGR RRELSLAAAT  300
APCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B8e-20871471779Disease resistance protein RRS1
5w3x_D8e-20871471779Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00167DAPTransfer from AT1G29280Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7283111e-117KJ728311.1 Zea mays clone pUT6591 WRKY transcription factor (WRKY103) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817654.11e-141probable WRKY transcription factor 65
TrEMBLA0A3L6SS551e-143A0A3L6SS55_PANMI; Putative WRKY transcription factor 65
STRINGPavir.Eb03138.1.p1e-140(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70883651
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.13e-36WRKY DNA-binding protein 65