PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00009.1.g04060.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 1449aa    MW: 158221 Da    PI: 9.5319
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00009.1.g04060.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM156.79.5e-49401652128
                           NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82 
                                   +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgy
  Zjn_sc00009.1.g04060.1.am.mk  40 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGY 119
                                   79***************************.89***************8778899*************************** PP

                           NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   Wkatg d+ + +++++ +glkktLvfy+g+apkg++++W+m+eyrl
  Zjn_sc00009.1.g04060.1.am.mk 120 WKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL 165
                                   ********************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100555.35439186IPR003441NAC domain
SuperFamilySSF1019416.28E-5539186IPR003441NAC domain
PfamPF023659.9E-2441165IPR003441NAC domain
PfamPF030942.9E-13871922IPR004326Mlo-related protein
PfamPF030944.3E-129401022IPR004326Mlo-related protein
PfamPF030941.3E-2310291090IPR004326Mlo-related protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1449 aa     Download sequence    Send to blast
MSSGRLENGQ SAAAPAVEGG GGGGRGGEGG GDSHEDDLVM PGFRFHPTEE ELIEFYLRRK  60
VEGKRFNVEL ITFLDLYRYD PWELPALAAI GEKEWFFYVP RDRKYRNGDR PNRVTASGYW  120
KATGADRMIR AENNRPIGLK KTLVFYSGKA PKGVRSSWIM NEYRLPPDDT DRYNKTEISL  180
CRVYKRSGID DGHGSRPSSA RSTPSSGATA QRDTNKQAAS SSSTPTPTPT PTPPATPSKL  240
HLLHGERTSP PAVADHARGH KAPSAPRQQK PSSAYLSATS ASADGDHQHE GTAATPYEHP  300
RNTNAFASTY SLLSLVNAAA MGTSSAAAID ELSTLVGHGS PSTAYFNHHQ QAGGHSHFLS  360
LPTAPPSSQP VLPVSLQAAI SDKIWEWNTI ADAAGRDYSS AGFNCIDPRH GASARAGARR  420
WRGTCIPILL MTVAEIAARR FGDDWERTRR MSGAYTERRR TVSEIDLSID SFGDNHEQTR  480
TCFTHARVLT RTYYTNIRRS PLPEPIELCW RPAMDPDPNI IDRQARARHD ETSTTTSVAT  540
HSPRQIDGSL ESLRRRLLFA LCLWPTAPAP RCPSSATRAC EQGSAQARGK ASLFAVIKRP  600
PLRTRGDAAC GCAARGLAGG ATMGAHDELV ETERSDCVHG CVRMVCLPMF MDNTTPFLCG  660
CASASSPLSV RELKRPDRSV ASRAIVWVKA DFLTVHFLFG NDLKISRSIA RLETPVLLSP  720
AAFRRPVLSP FCLSPPSRLP PVHGQGTDDG MTTALMLPTD PKARHEEQET VVRAPSSWGH  780
ERPLTCRARQ CGAGVRHRSA PRANPTYLVP QDNAKSRATN PTEPQNHANH CTTATPPSAS  840
RQECWARAGL TERCRSVVGD RSGGDDGEAA ALEFTPTWIV AAVCSLIVLI SLAAERCLHY  900
LGKTLKGKNQ KALFEALLKV KEGTVDQSTS LFVWILFACI RRQLMLLGFI SLLLTVFQWM  960
IQKTCIPRGW TSYMLPCQNA KDEAEMSQSE PEPHAMAAGV FGPAHRWLLA EGGPGAQHCQ  1020
KKVVDYQSIK HVITQLAHEV AEKHSAIDGD LVVNPSDEHF WFGRPRIVLY LIHFILFQNA  1080
FEIAFFFWIL EIFDEHVRQG LVGWAQKAKK RKAMRNGGTG SAAGSTHGSS SYPSARLELM  1140
RRAVDLDEGS AGGEGQSARS PGHRPGGMNP QDAGAVGPYS KFTRRDREPT PGSWNTRIRG  1200
GGGTSAQQNK PGQNPLPQSP EQKHMLCSSR AGFVQRTCFA RKQARADSYS LVVYRSSSPF  1260
AHSLPFLVLG CRDYFRRSDQ SELCWFLTPT SEAAMATVSE PYTIAERRRT IKRIPSRRKG  1320
AAMQRRRPGT ATSGRGQGSP PPGYFSVELA LVFLCVAASL AFLPLVLPPL SPPPFLLLLV  1380
PVCLLAVLVA LAFVPLDAQS YLVGSSRHAT HVSGAVCPGR HGAEFRSGMA AAVEAEHSHL  1440
RHMGSRSVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-514118622168NAC domain-containing protein 19
3swm_B2e-514118622168NAC domain-containing protein 19
3swm_C2e-514118622168NAC domain-containing protein 19
3swm_D2e-514118622168NAC domain-containing protein 19
3swp_A2e-514118622168NAC domain-containing protein 19
3swp_B2e-514118622168NAC domain-containing protein 19
3swp_C2e-514118622168NAC domain-containing protein 19
3swp_D2e-514118622168NAC domain-containing protein 19
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12230GGRGGEGGG
213161326RRKGAAMQRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00257DAPTransfer from AT2G02450Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFR8197620.0FR819762.1 Hordeum vulgare subsp. vulgare mRNA for NAC transcription factor (NAC012 gene).
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.13e-93NAC domain containing protein 35