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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zjn_sc00009.1.g03440.1.sm.mk |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 365aa MW: 41197.3 Da PI: 10.5981 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00009.1.g03440.1.sm.mk | genome | ZGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 42.9 | 8.5e-14 | 84 | 171 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80
ffkv+ ++++ + +p +fa+++ + ++s + led+ g +W+v+l r ++ l+ GW++Fv ++ + g+f+
Zjn_sc00009.1.g03440.1.sm.mk 84 FFKVM--VGRFSES-MDIPPPFAKTIlD--MAGS-NIYLEDSFGLRWRVRL--RLRGAVLSLGHGWNNFVLDHAVSCGEFL 156
66666..5555555.99******99952..2343.7***************..77777799******************** PP
EEEE-SSSEE..EEEEE CS
B3 81 vFkldgrsefelvvkvf 97
vF+ + rs f +v++f
Zjn_sc00009.1.g03440.1.sm.mk 157 VFRQIARSVF--TVQMF 171
***9888888..77766 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MAVTALKKEQ EDGVVHIDSG EDEEAEKVVK RRRKRKKKKA IDPRCTKRPC VDCTRRCARI 60 HGRVSSSSSG NNNKARPVPA VPSFFKVMVG RFSESMDIPP PFAKTILDMA GSNIYLEDSF 120 GLRWRVRLRL RGAVLSLGHG WNNFVLDHAV SCGEFLVFRQ IARSVFTVQM FAPSAIERLY 180 LCERNRRQSR KRKPRQKASS PRIQTGKIIK SNGGSCKRKR RADAQSEEVP DDCKMSAHLC 240 IDDSDVSDSA SELKCLGKSL KAPEAGESQE VSKALTTNQE GNVQRELPSR LPVIPRTKKQ 300 GRKVVVLKDP FKRLWPALYQ CTPRFSGFIT GWVEISRENS LREGDTCEFE LSGKKEFSFQ 360 VRSGH
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 30 | 38 | RRRKRKKKK |
2 | 32 | 36 | RKRKK |
3 | 32 | 38 | RKRKKKK |