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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00009.1.g00860.1.sm.mkhc |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
bHLH |
| Protein Properties |
Length: 222aa MW: 24215.2 Da PI: 6.5115 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00009.1.g00860.1.sm.mkhc | genome | ZGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 48.4 | 1.6e-15 | 65 | 117 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+ +hn+ Er RR+++N+ ++ Lr+llP a + kKls +++ ++++YI +Lq
Zjn_sc00009.1.g00860.1.sm.mkhc 65 RKLSHNAYERDRRKQLNELYSSLRSLLPDA--DHTKKLSIPTTVSRVIKYIPELQ 117
6889*************************7..35666***************998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010106 | Biological Process | cellular response to iron ion starvation |
| GO:0055072 | Biological Process | iron ion homeostasis |
| GO:0046983 | Molecular Function | protein dimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 222 aa
Download sequence Send
to blast |
MDHRLFNDPF ASSISSLEPD IFSGGQLPWP DLDLDDDDIH DLSPPAANAA TSSGGYGSGG 60
SGTNRKLSHN AYERDRRKQL NELYSSLRSL LPDADHTKKL SIPTTVSRVI KYIPELQKQV 120
DSLEKKKKEL TNANCKPGLS KASESIAPVV SATCLNDMEI MLQVSLPTNL AATTLPLSKC 180
IKLLENEGVQ LISSSTHSTF ENRTFYSLHL QGNTKSAINS IT
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds to the DNA motif 5'-CACGTGG-3' in the promoter of iron (Fe) deficiency-inducible genes as well as of genes involved in iron homeostasis, thus contributing to basal tolerance to iron deficiency, iron uptake from soil and iron transport, particularly during seed maturation and germination. Promotes the accumulation of mugineic acid family phytosiderophores (MAs). Required for ethylene-mediated signaling during iron deficiency responses. Improves growth and yield, especially in calcareous soil with low iron availability. Promotes iron concentration in shoots and grain. {ECO:0000250|UniProtKB:Q0JFZ0}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CT833597 | 1e-60 | CT833597.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113H03, full insert sequence. |
| GenBank | CT833598 | 1e-60 | CT833598.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA042K05, full insert sequence. |
