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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zjn_sc00008.1.g10410.1.sm.mk |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
YABBY |
| Protein Properties |
Length: 177aa MW: 19295 Da PI: 4.685 |
| Description |
YABBY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00008.1.g10410.1.sm.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | YABBY | 50.2 | 1.1e-15 | 15 | 66 | 6 | 53 |
YABBY 6 sseqvCyvqCnfCntilavsvPsts....lfkvvtvrCGhCtsllsvnlaka 53
seq+ yvqC+fC+til+vsvPs s l k+v+v+CG C+ +lsv+l +
Zjn_sc00008.1.g10410.1.sm.mk 15 LSEQLGYVQCSFCTTILLVSVPSYSdalqLTKTVAVQCGNCAGVLSVTLPPQ 66
689*******************9875555789***************99765 PP
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| 2 | YABBY | 58.1 | 3.8e-18 | 105 | 170 | 108 | 159 |
YABBY 108 evprvppvirPPekrqrvPsaynrfik..............eeiqrikasnPdishreafsaaakn 159
v pv++PP +rqr Psayn+fik eei+rik ++P+ish++afsaa+kn
Zjn_sc00008.1.g10410.1.sm.mk 105 AEDVVFPVNKPPVRRQRTPSAYNCFIKwvcgisnvvqnvirEEIRRIKEKDPSISHKQAFSAASKN 170
2334679******************87777777777777779***********************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MSSSPECSPC LGILLSEQLG YVQCSFCTTI LLVSVPSYSD ALQLTKTVAV QCGNCAGVLS 60
VTLPPQTPTP VVELRLPLQE PGVDPPPRES EDESSGEDRE LEAEAEDVVF PVNKPPVRRQ 120
RTPSAYNCFI KWVCGISNVV QNVIREEIRR IKEKDPSISH KQAFSAASKN LFGATAY
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