PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00008.1.g09740.1.am.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 609aa MW: 65488.4 Da PI: 6.2966

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00008.1.g09740.1.am.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	33.3	9.8e-11	419	440	1	22
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vkg+++p Zjn_sc00008.1.g09740.1.am.mkhc 419 LDDGYRWRKYGQKVVKGNPNPS 440 59******************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	2.1E-13	404	439	IPR003657	WRKY domain
SuperFamily	SSF118290	1.06E-8	411	440	IPR003657	WRKY domain
PROSITE profile	PS50811	14.883	414	439	IPR003657	WRKY domain
SMART	SM00774	1.7E-4	419	454	IPR003657	WRKY domain
Pfam	PF03106	3.0E-6	420	439	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence Send to blast
MAGTSDHGSL MEEWMPSLTP SPRTLMSSFL NEEFSPGPFS SRFGDPSNKQ PLAQSEKSRV 60 PVNLSAEIPT QAEKNTIQKD FPLDPIFFNS IQKSNSHSGL AERRAARAGF SVPKIDTSRF 120 GSSTIIRSPV SIPPGLSPTT LLESPVFLYN KMAQPSPTTG KLPFSVGTES NSTIPPSAKI 180 NEDCAIDNDI FSFQPHLGSK EPSFSTADKV IYWNISICHI FFSFFVAVYG FVLLSFSPPN 240 ALFCPFLCLK RCFMVQDYSA YRQQESNLQS NFSAVKDNTD ERNVKPVTSD SMFHYSAGEQ 300 VDSETNQNLQ GGGIEVKPAD CLRISAQGGA SIMESQDALD ISSTLSNEEE ERDTHGIVSA 360 DCDGNEDGIE SKRRKVDSLG VATVTTAATN SAMDMGAAAS RSVREPRVVV QTTSEVDILD 420 DGYRWRKYGQ KVVKGNPNPS APSATQASYR RQESASGNFA HFGGTAPFGS LVLPPRGHLG 480 PAAGNFHFGM VPPGMAIPMP SLGSLAPTTM VQSSPAMQGY QGSMMPGELK AELVSQSSFP 540 RGNAAPSVYQ QMMSRPPFGP QISERSTGPG LAPVVGDGAR VCYRSPYAWC SSPAIIGSGF 600 AAMHTHTKN

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence Send to blast

MAGTSDHGSL MEEWMPSLTP SPRTLMSSFL NEEFSPGPFS SRFGDPSNKQ PLAQSEKSRV  60
PVNLSAEIPT QAEKNTIQKD FPLDPIFFNS IQKSNSHSGL AERRAARAGF SVPKIDTSRF  120
GSSTIIRSPV SIPPGLSPTT LLESPVFLYN KMAQPSPTTG KLPFSVGTES NSTIPPSAKI  180
NEDCAIDNDI FSFQPHLGSK EPSFSTADKV IYWNISICHI FFSFFVAVYG FVLLSFSPPN  240
ALFCPFLCLK RCFMVQDYSA YRQQESNLQS NFSAVKDNTD ERNVKPVTSD SMFHYSAGEQ  300
VDSETNQNLQ GGGIEVKPAD CLRISAQGGA SIMESQDALD ISSTLSNEEE ERDTHGIVSA  360
DCDGNEDGIE SKRRKVDSLG VATVTTAATN SAMDMGAAAS RSVREPRVVV QTTSEVDILD  420
DGYRWRKYGQ KVVKGNPNPS APSATQASYR RQESASGNFA HFGGTAPFGS LVLPPRGHLG  480
PAAGNFHFGM VPPGMAIPMP SLGSLAPTTM VQSSPAMQGY QGSMMPGELK AELVSQSSFP  540
RGNAAPSVYQ QMMSRPPFGP QISERSTGPG LAPVVGDGAR VCYRSPYAWC SSPAIIGSGF  600
AAMHTHTKN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025802032.1	0.0	LOW QUALITY PROTEIN: probable WRKY transcription factor 2
TrEMBL	A0A3L6T8Q0	0.0	A0A3L6T8Q0_PANMI; Putative WRKY transcription factor 2
STRING	Pavir.J40119.1.p	0.0	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12338	22	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-23	WRKY DNA-binding protein 2