PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00008.1.g07180.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 459aa MW: 50451.1 Da PI: 8.3166

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00008.1.g07180.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.7	2e-31	104	266	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatg 71 lp+G++F+Ptd+el+ e+L++kv+ + ++++ i+ +i++++P++Lp ++++ + ++F++ +k+y+tg Zjn_sc00008.1.g07180.1.am.mk 104 LPAGVKFDPTDQELI-EHLEAKVRPGTgaapshplIDEFIPtIEGEdGICYTHPEKLP-GLTKDGLSRHYFHRPSKAYTTG 182 799**********.99**999888886553333334776646******.455566789********* PP NAM 72 krknra..........................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmh 124 +rk+r+ ++ +W++tgk+++v++ g++ g+kk+Lv+y g+++k++kt+Wvmh Zjn_sc00008.1.g07180.1.am.mk 183 TRKRRKiqpptaatssssspaaqhqqqqqqqkRSETRWHKTGKTRPVVV-AGRQRGCKKILVLYtnFGKHRKPQKTNWVMH 262 *88****************9998755789********.9999******5547999999*** PP NAM 125 eyrl 128 +y+l Zjn_sc00008.1.g07180.1.am.mk 263 QYHL 266 98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	6.8E-35	96	189	IPR003441	NAC domain
PROSITE profile	PS51005	28.365	104	285	IPR003441	NAC domain
Pfam	PF02365	7.8E-15	105	266	IPR003441	NAC domain
SuperFamily	SSF101941	6.8E-35	216	285	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence Send to blast
MSTQCNLPVE QAERSLASAS RLRRVQLPYP PIHDRNPALI RVGKGFSGNL GGEGEELEAT 60 MDGGASTAAT SGGNLQEQRK YMSESSCCPR CGHKINRLLD WVGLPAGVKF DPTDQELIEH 120 LEAKVRPGTG AAPSHPLIDE FIPTIEGEDG ICYTHPEKLP GLTKDGLSRH YFHRPSKAYT 180 TGTRKRRKIQ PPTAATSSSS SPAAQHQQQQ QQQKRSETRW HKTGKTRPVV VAGRQRGCKK 240 ILVLYTNFGK HRKPQKTNWV MHQYHLGEAE EEREGELVVS KIFYQTQPRQ CGAAEPSAAS 300 SAATVEMSDQ AAAVPVATSS SSAGVAFQGA VGIDEFNFAQ FRSSQVQARD DDQEVHAGQH 360 HHLQQEHDLR HPYANQEQQR MAAAAAAAFH IRTPTDPITA LITPPPLLHH GRRPAGFWTG 420 RGDYGLHFKE GHGNGSGSKA STDWQYPSFW PPDNQDHDG

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence Send to blast

MSTQCNLPVE QAERSLASAS RLRRVQLPYP PIHDRNPALI RVGKGFSGNL GGEGEELEAT  60
MDGGASTAAT SGGNLQEQRK YMSESSCCPR CGHKINRLLD WVGLPAGVKF DPTDQELIEH  120
LEAKVRPGTG AAPSHPLIDE FIPTIEGEDG ICYTHPEKLP GLTKDGLSRH YFHRPSKAYT  180
TGTRKRRKIQ PPTAATSSSS SPAAQHQQQQ QQQKRSETRW HKTGKTRPVV VAGRQRGCKK  240
ILVLYTNFGK HRKPQKTNWV MHQYHLGEAE EEREGELVVS KIFYQTQPRQ CGAAEPSAAS  300
SAATVEMSDQ AAAVPVATSS SSAGVAFQGA VGIDEFNFAQ FRSSQVQARD DDQEVHAGQH  360
HHLQQEHDLR HPYANQEQQR MAAAAAAAFH IRTPTDPITA LITPPPLLHH GRRPAGFWTG  420
RGDYGLHFKE GHGNGSGSKA STDWQYPSFW PPDNQDHDG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004966092.1	1e-168	uncharacterized protein LOC101753253
TrEMBL	A0A368QXL4	1e-167	A0A368QXL4_SETIT; Uncharacterized protein
STRING	Si006435m	1e-166	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1453	38	117

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	8e-94	NAC domain containing protein 75