PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00008.1.g00360.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 289aa    MW: 32850.3 Da    PI: 7.9849
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00008.1.g00360.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.24.3e-46141423128
                           NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksg 81 
                                   pGfrFhPt+eel+++yLk+ v+gkkl++ ++i++v +y++ePw+Lp  ++ +e+ewyfF++rd+k++   g r++r+t++g
  Zjn_sc00008.1.g00360.1.am.mk  14 PGFRFHPTEEELLQFYLKQVVHGKKLKF-DIIPTVLLYRHEPWELPGLARVGEREWYFFVPRDRKQQpgGGGRPSRTTERG 93 
                                   9**************************9.99***************8778899************9954578********* PP

                           NAM  82 yWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                   +Wkatg+d++v ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  Zjn_sc00008.1.g00360.1.am.mk  94 FWKATGSDRAVRCAddPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 142
                                   ************98666778***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.99512171IPR003441NAC domain
SuperFamilySSF1019417.98E-5313171IPR003441NAC domain
PfamPF023651.6E-2414142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MKRRGEGAAE LELPGFRFHP TEEELLQFYL KQVVHGKKLK FDIIPTVLLY RHEPWELPGL  60
ARVGEREWYF FVPRDRKQQP GGGGRPSRTT ERGFWKATGS DRAVRCADDP KRLIGLKKTL  120
VYYEGRAPRG TKTDWVMNEY RLPDSVAAGQ LGDHSSPPPK EDMVLCKIYR KAVSLKELEQ  180
RVAMEELARA TATPSDSNND DTGSHADSIS SSEPHPHNQA VTSTEMKKEE EACCAVVRPA  240
TLSLPQLEVA RPLQQQLGAE WMMQNPLLTQ LRSPWMETWS PYYASVLNF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-4411713168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0036851e-112AP003685.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0548E04.
GenBankAP0046851e-112AP004685.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0017G10.
GenBankAP0149621e-112AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBankCP0126141e-112CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.
GenBankCU4067031e-112CU406703.1 Oryza rufipogon (W1943) cDNA clone: ORW1943C111K18, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966508.11e-146NAC domain-containing protein 67
SwissprotQ10S653e-97NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLK3XYI61e-145K3XYI6_SETIT; Uncharacterized protein
STRINGSi006994m1e-145(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.14e-83NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]