PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00007.1.g11670.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 738aa    MW: 79699 Da    PI: 10.6844
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00007.1.g11670.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.21.1e-51221511128
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                   lppGfrFhP+dee++++yL++kv ++++++ ++i e+di+k+ePw+Lp k+k +ekewyf+s +  ky++g+r+nratk+g
  Zjn_sc00007.1.g11670.1.am.mk  22 LPPGFRFHPSDEEIITFYLRPKVINNRFTA-HAIGEADINKCEPWELPDKAKMGEKEWYFYSLKGLKYPSGSRANRATKAG 101
                                   79*************************999.88***************99999**************************** PP

                           NAM  82 yWkatgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrl 128
                                   yWkatgkd+e++++++++   vg+kktLvfykgrap+g ktdWvmhe+rl
  Zjn_sc00007.1.g11670.1.am.mk 102 YWKATGKDREIYQATSKKpvlVGMKKTLVFYKGRAPTGDKTDWVMHEFRL 151
                                   *************85554566***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.32E-5918188IPR003441NAC domain
PROSITE profilePS5100556.2922188IPR003441NAC domain
PfamPF023652.1E-2523151IPR003441NAC domain
Gene3DG3DSA:3.40.50.23002.1E-8672727No hitNo description
SuperFamilySSF521724.27E-7673730IPR011006CheY-like superfamily
PROSITE profilePS5011012.139674738IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.83E-5676738No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    Send to blast
MADHQQQQWR TSDDTNSGGL KLPPGFRFHP SDEEIITFYL RPKVINNRFT AHAIGEADIN  60
KCEPWELPDK AKMGEKEWYF YSLKGLKYPS GSRANRATKA GYWKATGKDR EIYQATSKKP  120
VLVGMKKTLV FYKGRAPTGD KTDWVMHEFR LDGSGKLPHP AASSSSSTGM VMKSSFQEEW  180
VICRIYLKSS SVKKAPTPSI DIASVVGDVE QRSMSFPLPM QFSMGPEDFA GGSNTLRHIM  240
DPSPGEVLAR KTGSLIAADP EPVIAYAVAE MRSARHHGRT KVEQSPVTGE NRTEGSVRPA  300
ESPCRRTSTT VLVAPAPPGP AALGVPTAGY CWRPRVPRCR LRRVQSIGRA GAALARRIPS  360
RVLSGTQAGA RSSLTRRSSS VTHPLLQCGT VTRSAAERAP SVLVTGVHLQ LVTVCANHLN  420
QVLKKLLDHR RLPVASNGSA RVAADVLPHG FLTRGSDSQA FHDALYLLAL FRKDPVLARR  480
AALEKFGARS RFGCQCRYAV TVFLSNGGSW LATPGPGGHV PPPSSSEDGR TRSFFCKEKR  540
SCPGGGGVNS RDSCVLPLRQ QGKDFISAAR TRGHVWIPPD SLAAQLTRDL LDDRLAICFR  600
IRQAAGSPRA YITAPPGPGR GGTRRRRSSS QCSLHSAFVD VSECLVSFGV QMSTVGGAVV  660
APAAKAGGGA GTPHVLAVDD SSVDRAVIAA ILRSSRFRVT AVESGKRALE LLGSESSELK  720
QIPVVIMSSE NVPTRISR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-462019418174NAC domain-containing protein 19
3swm_B3e-462019418174NAC domain-containing protein 19
3swm_C3e-462019418174NAC domain-containing protein 19
3swm_D3e-462019418174NAC domain-containing protein 19
3swp_A3e-462019418174NAC domain-containing protein 19
3swp_B3e-462019418174NAC domain-containing protein 19
3swp_C3e-462019418174NAC domain-containing protein 19
3swp_D3e-462019418174NAC domain-containing protein 19
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2496564e-35AB249656.1 Oryza sativa Japonica Group OsRR11 mRNA for typeA response regulator 11, complete cds.
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3311234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.23e-67Arabidopsis NAC domain containing protein 87