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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00006.1.g06150.1.sm.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 166aa MW: 18543.6 Da PI: 4.8755 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 26.1 | 1.9e-08 | 4 | 34 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk+i lm+v+++ ++++ HLQk+R Zjn_sc00006.1.g06150.1.sm.mk 4 TTATPKKIELLMNVNSIDRKQISAHLQKHRK 34 57***************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.1E-6 | 5 | 36 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MIPTTATPKK IELLMNVNSI DRKQISAHLQ KHRKRMDKEL KDSMLLKKAG KNSSSSRRLR 60 KSCEEAVSEN NDIQPEDRTV TENIIRETKG RKVYEAMRKA LQHGTVFDEQ LSDDPSAEEA 120 EQGEAYMMED SIAQDDAAGA KEVSNNADSD EGGPVKLVTY SDSEDA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | K3YEV5 | 3e-32 | K3YEV5_SETIT; Uncharacterized protein | ||||
STRING | Si012772m | 5e-33 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5920 | 23 | 45 |