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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zjn_sc00004.1.g12740.1.sm.mkhc | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | G2-like | ||||||||
Protein Properties | Length: 183aa MW: 20046.5 Da PI: 4.927 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.7 | 2.2e-12 | 36 | 61 | 1 | 26 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+r+rWt++LHerFv+ v+qLGG+++ Zjn_sc00004.1.g12740.1.sm.mkhc 36 KTRIRWTQDLHERFVDSVNQLGGADR 61 68*********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.7E-10 | 35 | 66 | IPR009057 | Homeodomain-like |
Pfam | PF14379 | 2.0E-19 | 82 | 127 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence Send to blast |
MQIPGENALS MSCTMGAPAT HTSKVITLPG QGAPSKTRIR WTQDLHERFV DSVNQLGGAD 60 RKHEKRAAGN DVLNLDPNTG EQITEALRVQ LDVQRRLHEQ LAMQRNLQLK IEEQGKRLQK 120 MFEEQLKASK SVLEPREQLQ GAGAALDEVI GVGDEEDDAC DDVQLLSVAS SCCNDAGFPS 180 KIS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025822779.1 | 2e-79 | probable transcription factor KAN2 | ||||
Refseq | XP_025822780.1 | 2e-79 | probable transcription factor KAN2 | ||||
Swissprot | Q0WVU3 | 7e-31 | PHL5_ARATH; Myb family transcription factor PHL5 | ||||
TrEMBL | A0A0A9GJK1 | 4e-81 | A0A0A9GJK1_ARUDO; Uncharacterized protein | ||||
STRING | Si022099m | 4e-78 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6933 | 37 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 6e-33 | G2-like family protein |