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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zjn_sc00004.1.g11820.1.am.mkhc |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
AP2 |
Protein Properties |
Length: 321aa MW: 34401 Da PI: 7.3607 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zjn_sc00004.1.g11820.1.am.mkhc | genome | ZGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 47.1 | 6e-15 | 71 | 121 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+y+GV+ +k grW+A+ + +k+++lg f+t+eeAa+a+++a+ k +g
Zjn_sc00004.1.g11820.1.am.mkhc 71 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEEEAARAYDRAAIKCNG 121
89********.7******5553..2.26**********************99776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MDMACAGGFD TAHAAARAYD RAAIKFRGVE ADINFSLEDY QDDMKQIGNL SKEEFVHVLR 60 RQSTGFPRGS SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEEEAAR AYDRAAIKCN 120 GKDAATNFDP SMYAEELEPS SAATGGDEHN LNLSLGSSAG SKRGSLDGGG DEESSDHRVL 180 MAFDLDWQTA AARSTKAKQF DQSSKQAQMP PALQASQHLS FNPRHHHQFL SGGDPGTSGG 240 LSLMIGGAGG GGGHCPPPLQ QPQRLPRGWG NTTTWPPYPP SPSTGAAATA TAAAASSRFP 300 PYVTTQQAPS WTGFHSLTRP T
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor (PubMed:22408071). Involved in spikelet transition and development (PubMed:22408071). Prevents lemma and palea elongation as well as grain growth (PubMed:22408071). Required for seed shattering through specifying abscission zone (AZ) development (PubMed:22408071). {ECO:0000269|PubMed:22408071}. |