PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00003.1.g07320.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 742aa    MW: 80416.7 Da    PI: 9.2571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00003.1.g07320.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12580627355
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   + h  +ErrRR+++ + f  L +l+P +     +K +K++iL  ++eY+k+L+
  Zjn_sc00003.1.g07320.1.am.mk 580 QEHVVAERRRREKMQQQFVALATLVPDL-----TKTDKISILGSTIEYVKQLE 627
                                   57999**********************9.....9*****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.135577626IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-10580627IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-17581637IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-15581638IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.56E-11582631No hitNo description
SMARTSM003531.6E-13583632IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MWWNWKGIYP SDNMCTVGIT TTGAMHEPEF GSSPDTTAAP RALSFVSSSG KKLVKIKREK  60
AHTVARTIAT GLGSDGPTNE LVCLAFRRDG SPDHVVADTG CSGGRASASV SAGRQWRNSG  120
RLRRMAAIDG WRLGQGSDNP LDFDHRSEDA KSSDRWRHQD GEAAWRQRQQ RGPHTGAVAA  180
HAASACDPGQ ATQRNATYPN SDHVDRSTSF SSSTSQAQAR ARAGSRSSLW EGGRSIGMPK  240
SQPARPATRC GNIRELTRGS PSRRREHSSS SLLAVASGAL AARVDRARHR PAPPPPPHFP  300
VRGSRECYLS VTHARHGPCF VEFERTRCER TAGRSRATGP SVSRLTSSAG SFFLTHVTDR  360
FRCTALRCTM RLASALLPSP ATDEGRGVSD ECSDVKAPVG REAQPSHFDQ CGSKEEAVDR  420
TRPRSRKGPA RWVLHTSQIW GCVARVTGAV AAAPELEDEL ERMYQHEEQP GMLAHPPPEQ  480
QRYYTSPQAM APPNPYHPSP HSQSSAFPSF GPGHALPTPP FRGVAVKNEV GQPSSSTSNI  540
LSFGGQQTRT LSFSAGDWTD GTEAVQQVPE RRNRTHLNTQ EHVVAERRRR EKMQQQFVAL  600
ATLVPDLTKT DKISILGSTI EYVKQLEEKV RTLEEQSATG ASDPTVFEGK CRISSDNVDA  660
SWPNASASAG AVSGYVPTVE ASIHGDTVLV KICCKEGRGV LVMVFSEVEN HGLSILSTSV  720
LPFTDSCLSI TITAKARLLV LD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1585590ERRRRE
2586591RRRREK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64013149
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-29bHLH family protein