PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zjn_sc00002.1.g09780.1.sm.mkhc

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 68aa MW: 7461.78 Da PI: 4.9741

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00002.1.g09780.1.sm.mkhc	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	40.7	5.2e-13	41	67	25	51
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQ 51 ++A+Pk+ilelm+v+gLt+e+v+SHLQ Zjn_sc00002.1.g09780.1.sm.mkhc 41 HEAVPKKILELMNVPGLTRENVASHLQ 67 68************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.40.50.2300	9.1E-6	15	41	No hit	No description
SuperFamily	SSF52172	2.13E-5	15	41	IPR011006	CheY-like superfamily
SuperFamily	SSF46689	5.2E-6	37	67	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.6E-12	41	68	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	2.9E-11	42	67	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 68 aa Download sequence Send to blast
MAAAAEARGG EFPVGMKVLV VDDDPTCLLV LQKMLDECRY HEAVPKKILE LMNVPGLTRE 60 NVASHLQV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025794212.1	4e-17	two-component response regulator ORR21
Refseq	XP_025794213.1	4e-17	two-component response regulator ORR21
TrEMBL	A0A2S3ISS2	1e-15	A0A2S3ISS2_9POAL; Two-component response regulator
TrEMBL	A0A2T7CFI5	1e-15	A0A2T7CFI5_9POAL; Two-component response regulator
TrEMBL	A0A3L6SBE0	1e-15	A0A3L6SBE0_PANMI; Two-component response regulator
STRING	Pavir.Ib00921.1.p	8e-16	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP24749	3	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	8e-12	response regulator 1