PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g11200.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 341aa    MW: 37713.2 Da    PI: 7.4735
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g11200.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM509.7e-16682084128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P++  l+++yL+kkv+g +    l  +  +++ d++++ P  L +          + +++ ++ yfF+k++   ++
  Zjn_sc00001.1.g11200.1.am.mk  68 SFSFCPSNALLINHYLRKKVDGADvfsdLANAAYFHDEDVCSARPDVLVRahtiparvpsREAGDGQQFYFFTKARFIGNK 148
                                   589*********************8865333345**************744677776664323355577888887755544 PP

                           NAM  71 ...gkrknratk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                       +r+ + t  + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zjn_sc00001.1.g11200.1.am.mk 149 lnmRSRTIKNTGdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 208
                                   1013344443334778*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.53165224IPR003441NAC domain
SuperFamilySSF1019414.05E-2265224IPR003441NAC domain
PfamPF023658.6E-1269207IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MEACPLESSR SCSRSARPRR ELQHVAVQDR STCPSTESSK SPPSPTICRR CSNSPPTRPI  60
EMAAMDDSFS FCPSNALLIN HYLRKKVDGA DVFSDLANAA YFHDEDVCSA RPDVLVRAHT  120
IPARVPSREA GDGQQFYFFT KARFIGNKLN MRSRTIKNTG DKETWHAEGS AKPVDGTADG  180
YMTKLSYHVK TGPKTVEKPG WIMTEYSFKD TKEGDLVLCK IYKSPRGPGR SKAPSLPAMS  240
DGKRKAADDL GEATPSTRPR QIDEDRQHAA VLEFGAERSQ LTQDMPANSN SNSALEDIDW  300
SWFMPESEAE RSQPHLAKPA SSGSNVTLED IKLWANLLLA D
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.13e-09NTM1-like 8