PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g11180.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 279aa    MW: 31169 Da    PI: 6.3191
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g11180.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.39e-1771474128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P++  l+++yL+kk++g +    l+ +  +++ d++++ P+ L +          + +++ ++ yfFsk++  +++
  Zjn_sc00001.1.g11180.1.am.mk   7 SFSFCPSNALLINHYLRKKIDGAEvfsnLTNAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFSKARLIENK 87 
                                   589*********************8865444356**************744677776654333356688999999877766 PP

                           NAM  71 gkrknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                    + ++r++k    + +W+a g++k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zjn_sc00001.1.g11180.1.am.mk  88 LNMRSRTIKntgdKETWHAEGRTKPVDG---TADGYITKLSYHVKTGPKtVEKPGWIMTEYSF 147
                                   4444443222224778**********65...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.1254163IPR003441NAC domain
SuperFamilySSF1019412.09E-227163IPR003441NAC domain
PfamPF023651.1E-118146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MAAMDDSFSF CPSNALLINH YLRKKIDGAE VFSNLTNAAY FHDEDVCSAR PEVLVRAHTM  60
PARVPSREAG DGQQFYFFSK ARLIENKLNM RSRTIKNTGD KETWHAEGRT KPVDGTADGY  120
ITKLSYHVKT GPKTVEKPGW IMTEYSFKDT KEGDLVLCKV YKSPRGPVRS KAPSLPAMLD  180
RKRKAAEDLE EATPSTRPLQ IDENHQHAAV PEFGAERSQT QSMPASLDSN SALEDIDWSW  240
FMPESEAERS QPHLAKPASS GSNVTSEDIE LYAKLLLAD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.11e-09NTM1-like 8