PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g09710.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 348aa    MW: 38074.5 Da    PI: 6.5874
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g09710.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.31.5e-15752154128
                           NAM   4 GfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat 70 
                                    f F P++  l+++yL+kk++g +    l  +  +++ d++++ P  L +          + +++ ++ yfF+k++   ++
  Zjn_sc00001.1.g09710.1.am.mk  75 SFSFCPSNALLINHYLRKKIDGADvfsnLANAAYFHDEDVCSAPPDVLVRahimparvpsREAGDGRQFYFFTKARFIGNK 155
                                   589*********************8765333345**************744677876664333356688999998766555 PP

                           NAM  71 gkrknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                    ++++r++k    + +W+a g+ k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zjn_sc00001.1.g09710.1.am.mk 156 LNNRSRIIKntgdKETWHAEGSAKPVDG---TADGYMTKLSYHVKTGPKtVEKPGWIMTEYSF 215
                                   4455553322234678*********965...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.45972231IPR003441NAC domain
SuperFamilySSF1019411.23E-2272231IPR003441NAC domain
PfamPF023651.3E-1176214IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MPCIHQEASA AANYHPDDVG LASISDNRLP AVIGFAPGHA TDSSNSPPSP SIFLSTVSSN  60
SPPTRPIEMA AMDDSFSFCP SNALLINHYL RKKIDGADVF SNLANAAYFH DEDVCSAPPD  120
VLVRAHIMPA RVPSREAGDG RQFYFFTKAR FIGNKLNNRS RIIKNTGDKE TWHAEGSAKP  180
VDGTADGYMT KLSYHVKTGP KTVEKPGWIM TEYSFKDTKE GDLVLCKVYK SPRGPGRSKA  240
PSSPPAMSDR KRKAADDLEE ATPSTRPRQN NENHQHAAVP EFKAERSQTQ AMPASLDSNS  300
ALEDIDWSWF MPESEAERSQ PHLAKPASSG SNVTLEDIQL YAKLLLAD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.11e-08NTM1-like 8