PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00001.1.g08300.1.am.mk
Organism
Zoysia japonica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 251aa    MW: 27690.4 Da    PI: 8.3155
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00001.1.g08300.1.am.mkgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM492e-158913784129
                           NAM  84 katgkdkevlskkgel...vglkktLvfykgrapkgektdWvmheyrle 129
                                   k+ gkdke+++++  l   vg+kk+Lvfy+grapkgekt W+mheyrle
  Zjn_sc00001.1.g08300.1.am.mk  89 KTAGKDKEIYQASAMLptiVGMKKILVFYTGRAPKGEKTGWIMHEYRLE 137
                                   789********74433666****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.6161165IPR003441NAC domain
SuperFamilySSF1019416.28E-1889165IPR003441NAC domain
PfamPF023659.7E-798136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
LGRSGRAPVE VDGLELAGDH GCLRRSDLRR SPRYRSREIR GRPSEEEGGE IFVGVLRPSP  60
PPPSRGSLNA RYEHPAPTSC LHESRRLLKT AGKDKEIYQA SAMLPTIVGM KKILVFYTGR  120
APKGEKTGWI MHEYRLEGSG KLYFPTSSSN STISKEWVIC KVFKSSRNKE VHVPQSEEAR  180
ANNDIDQSTM SFSTSIQFST GPEDDFLVEL GVLCPNMDPT MPFYSTTDAS TSVAPMMPPM  240
TSMGTMGIDG I
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025801540.12e-35NAC domain-containing protein 79-like
TrEMBLA0A1E5V4C47e-40A0A1E5V4C4_9POAL; NAC domain-containing protein 79
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2792435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-22NAC domain containing protein 100