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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zjn_sc00001.1.g00620.1.sm.mk |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family |
NAC |
| Protein Properties |
Length: 234aa MW: 25669.9 Da PI: 5.4073 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zjn_sc00001.1.g00620.1.sm.mk | genome | ZGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 106.2 | 4e-33 | 2 | 77 | 54 | 129 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ekewyfF+++d+ky+tg r+nrat+sgyWkatgkdkev++ +g l g+kktLvf++grap+g+kt Wvmheyrle
Zjn_sc00001.1.g00620.1.sm.mk 2 GEKEWYFFCRKDRKYPTGMRTNRATASGYWKATGKDKEVFRGSGVLAGMKKTLVFHQGRAPRGKKTAWVMHEYRLE 77
579**************************************99*******************************85 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MGEKEWYFFC RKDRKYPTGM RTNRATASGY WKATGKDKEV FRGSGVLAGM KKTLVFHQGR 60
APRGKKTAWV MHEYRLEGER PPNLPAGAKD EWAVCRVFNK DLSAKPGLLQ QTASTSSAPA 120
AAGTMDSNDS LFFLDDPTEL MAMPPLVDPA PFPDDLVGLK GATAGASSSG NRQQVKTQEQ 180
PAAQNAPPLQ LQEDPYSYLA QPPPDEVGAD GVRSLEDDLL WPDGVTDYSD MWKV
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-30 | 1 | 105 | 68 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-30 | 1 | 105 | 68 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-30 | 1 | 105 | 68 | 170 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-30 | 1 | 105 | 68 | 170 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swm_B | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swm_C | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swm_D | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swp_A | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swp_B | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swp_C | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 3swp_D | 2e-30 | 1 | 105 | 71 | 173 | NAC domain-containing protein 19 |
| 4dul_A | 2e-30 | 1 | 105 | 68 | 170 | NAC domain-containing protein 19 |
| 4dul_B | 2e-30 | 1 | 105 | 68 | 170 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional activator that acts as positive regulator of leaf senescence. Activates NYC1, SGR1, SGR2 and PAO, which are genes involved in chlorophyll catabolic processes. Activates senescence-associated genes, such as RNS1, SAG12 and SAG13. {ECO:0000269|PubMed:27021284}. |
