PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zjn_sc00001.1.g00560.1.am.mk

Organism

Zoysia japonica

Taxonomic ID

309978

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 327aa MW: 35992 Da PI: 6.702

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zjn_sc00001.1.g00560.1.am.mk	genome	ZGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	41.5	3e-13	43	68	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 kprl+WtpeLHerFveav+qLGG+e Zjn_sc00001.1.g00560.1.am.mk 43 KPRLKWTPELHERFVEAVNQLGGPEM 68 79*********************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.5E-11	41	67	IPR009057	Homeodomain-like
Pfam	PF14379	2.5E-9	99	120	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain
Pfam	PF14379	2.6E-11	149	173	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MYHQQQLESH KQHLSSRPSL PHEKQFLLQG GGDSGLILST DAKPRLKWTP ELHERFVEAV 60 NQLGGPEMSG SRTATDKLCE GNGSPSSHFA LEPQMNRSMH ISEALQMQIE VQRRLHEQLE 120 PLNPVPERGQ AARGGDGGRS YQPFRRPPVQ RHLQLRIEAQ GKYLQSVLEK AQEALAKQSV 180 GVDGDVLGLE EDAASFKAPH PLPRPELTAN ASTKRQQHGV GDGSVDSCLT ACERDQHEML 240 SIGLCTTPRR SSQFGDGRRA SEEYMFLEEP SRGASAPGEN RCGEIRRNDG LGNARTAELL 300 GLSITHNSSS CPSRDGDRID LNGSTWN

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025803980.1	2e-96	myb-related protein 1-like isoform X2
TrEMBL	A0A0A9DHX6	1e-103	A0A0A9DHX6_ARUDO; Uncharacterized protein
STRING	Si030350m	3e-90	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP20987	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	2e-45	G2-like family protein