PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652260.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 352aa    MW: 39586.8 Da    PI: 4.7473
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652260.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.34.2e-25311324128
             NAM  24 egkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgr 112
                     +gk  ++ ++i+e+d++k+eP+dL +        + + w+ Fs+ + ++ ++ r nratk+g+Wk tgk +e++s+  +++++  k+tL+f++gr
  XP_016652260.1   3 QGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPRYRSINSLRYNRATKKGFWKITGKPREIKSQqlSKSVTCKKRTLTFHEGR 97 
                     5666677789**************85455533447789*************************************976666677789******** PP

             NAM 113 apkgektdWvmheyrl 128
                      +k++ktdWvm+ey l
  XP_016652260.1  98 VSKSTKTDWVMQEYYL 113
                     **************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100530.4711136IPR003441NAC domain
SuperFamilySSF1019411.44E-299136IPR003441NAC domain
PfamPF023652.3E-935112IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MMQGKASQAC HIIPEIDVCK YEPSDLAELL FPDSPYQPRM WFSFSRPRYR SINSLRYNRA  60
TKKGFWKITG KPREIKSQQL SKSVTCKKRT LTFHEGRVSK STKTDWVMQE YYLTQTEPGS  120
IPNQLSDFVL CRMKNKSAHY ESDNKKLKYA SICDESADPG IGGCVASNSE DDQAPESNMI  180
PEADRHLADK EPEHDLPGSG NHDAGEPDGC VSSDCDDMIQ ELSAQPGEYL DLHFPPPEPP  240
EPGNASVPSP IGNNDSSLPY KNNITTNYDS KPVSNTASNF KNQTRDERTS EVYSQPEEDP  300
ESFLQLKLDD YTWLSRILQP EQGNLLHANN SIGCNELQSP YPETAALFPQ SY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-151214246174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652260.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652260.10.0PREDICTED: NAC domain-containing protein 74-like
TrEMBLA0A251QLZ40.0A0A251QLZ4_PRUPE; Uncharacterized protein
STRINGXP_008244232.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3993322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.31e-22NAC transcription factor-like 9