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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016650765.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 351aa MW: 39264 Da PI: 5.2545 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156 | 1.7e-48 | 6 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrF+Ptd elv +yLk+kv gk+l++ ++i+evdi+k+ PwdLp k ++++ +wyfF+++++ky+tg r +r t+ gyWk+tgkd++vl XP_016650765.1 6 LPPGFRFSPTDVELVRYYLKRKVMGKRLHF-NFIAEVDIHKYAPWDLPeKsGWQSGDLKWYFFCPTARKYPTGVRVQRGTECGYWKSTGKDRSVL 99 79**************************99.99**************94345566778************************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++e+ g kk+L+f+kgr+pkge+tdWvmheyrle XP_016650765.1 100 Y-NSEVSGWKKILIFHKGRSPKGERTDWVMHEYRLE 134 *.999*****************************85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.7E-56 | 3 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 53.733 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.5E-25 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence Send to blast |
MGKPPLPPGF RFSPTDVELV RYYLKRKVMG KRLHFNFIAE VDIHKYAPWD LPEKSGWQSG 60 DLKWYFFCPT ARKYPTGVRV QRGTECGYWK STGKDRSVLY NSEVSGWKKI LIFHKGRSPK 120 GERTDWVMHE YRLEAKDLAD SGVPHDSYVI CMIFQKDGWG PKNGAQYGAP FKEEDWTDDE 180 AEICSEAVPH ENMSELNLVV QSNCNSSVTT SGHSPKGIHI GPSESCISDV LPPSCNVLQL 240 VSSNHVTIEK LHGSDGDILS MLNCFTEGST SLMKVNDKNE ELGNVIHSGN ASATPNVNSD 300 DIYEDLGDLG KMAKVSEDGY NFSNVHNSIC APAQMQLGDN EQFLELDDLS W |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-43 | 6 | 156 | 15 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_016650765.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016650765.1 | 0.0 | PREDICTED: NAC domain-containing protein 82-like | ||||
TrEMBL | A0A314XW53 | 0.0 | A0A314XW53_PRUYE; NAC domain-containing protein 82-like | ||||
STRING | EMJ05887 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3302 | 34 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64060.1 | 5e-94 | NAC domain containing protein 103 |