PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016648520.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 225aa    MW: 25779.7 Da    PI: 6.1228
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016648520.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.41.3e-2361371128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratk...sgyWkatg 87 
                     +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePwd+ +    + + +++++y F++ +kk+++g+r  r++    +g Wk   
  XP_016648520.1   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTkEPWDIWRdfhhSSADDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGGWKGED 99 
                     599************************999.99*******9879****643442222355588******************644333888***** PP

             NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k++ +  g+++g++k + + +  +p+    +W+m e++l
  XP_016648520.1 100 SGKKIRA-CGNDIGIRKRFRYMNPGSPH--DDRWIMLEFQL 137
                     ******9.999***********655555..89*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-283141IPR003441NAC domain
PROSITE profilePS5100525.976153IPR003441NAC domain
PfamPF023657.2E-157137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTKEPW DIWRDFHHSS  60
ADDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGGWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRW IMLEFQLHES LKETSGKSKL EERKNHEVDM ASRGEIQAQH VHDDQQQHID  180
ASTYDQLRVF EDFLMNDVEG EQDTMVNPTL LAHFACTVRS AGHKY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-15615217156NO APICAL MERISTEM PROTEIN
1ut4_B2e-15615217156NO APICAL MERISTEM PROTEIN
1ut7_A2e-15615217156NO APICAL MERISTEM PROTEIN
1ut7_B2e-15615217156NO APICAL MERISTEM PROTEIN
3swm_A2e-15615220159NAC domain-containing protein 19
3swm_B2e-15615220159NAC domain-containing protein 19
3swm_C2e-15615220159NAC domain-containing protein 19
3swm_D2e-15615220159NAC domain-containing protein 19
3swp_A2e-15615220159NAC domain-containing protein 19
3swp_B2e-15615220159NAC domain-containing protein 19
3swp_C2e-15615220159NAC domain-containing protein 19
3swp_D2e-15615220159NAC domain-containing protein 19
4dul_A2e-15615217156NAC domain-containing protein 19
4dul_B2e-15615217156NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016648520.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934140.0KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016648520.11e-171PREDICTED: NAC domain-containing protein 66-like
TrEMBLA0A314Z3U81e-136A0A314Z3U8_PRUYE; Uncharacterized protein
TrEMBLM5WX711e-136M5WX71_PRUPE; NAC66
STRINGXP_008226297.11e-142(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.11e-20NAC domain protein 66