PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016648008.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 278aa    MW: 31759.5 Da    PI: 5.0826
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016648008.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.61.4e-33912231128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdke 91 
                     lp G+rF+P+++e+vv+yL +k+ +++l++++vike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g+++e
  XP_016648008.1  91 LPTGYRFDPSEDEIVVYYLFNKILDRELPITDVIKEISVYDHDPDELPNgdfKHGCDCNEAFYFTYTEQIYSSeGKITRRTTKSGYWDLDGEEEE 185
                     699*********************************************5444444467799********99963677777*************** PP

             NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     v+   ++ +vg  k++vf+kg+ap+g +td +mhe+rl
  XP_016648008.1 186 VKYGnGDITVGFEKVMVFHKGTAPNGIETDFIMHEFRL 223
                     *99746677***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3489252IPR003441NAC domain
PROSITE profilePS5100537.33191252IPR003441NAC domain
PfamPF023655.4E-1792223IPR003441NAC domain
PROSITE profilePS510056.165263278IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MMKINIINTN KWHNSSSQNG TSIKTLENLS RKYIDHFISP SLLVFGADPN PISLIEQSFS  60
HNSPTQTRTQ THTKAQCSKI ENGKKEADVD LPTGYRFDPS EDEIVVYYLF NKILDRELPI  120
TDVIKEISVY DHDPDELPNG DFKHGCDCNE AFYFTYTEQI YSSEGKITRR TTKSGYWDLD  180
GEEEEVKYGN GDITVGFEKV MVFHKGTAPN GIETDFIMHE FRLNPLIVPT HVLNDSTRAK  240
IERYVVCRII HEGISNYQPT FKLPPGWTAR PVDEGEPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-248625210168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016648008.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016648008.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A251R4L41e-148A0A251R4L4_PRUPE; Uncharacterized protein
STRINGXP_008221517.11e-150(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15772611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-28NAC-like, activated by AP3/PI