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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_016514113.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
DBB |
| Protein Properties |
Length: 314aa MW: 34491.8 Da PI: 8.1718 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016514113.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 23.2 | 1.5e-07 | 4 | 42 | 5 | 37 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37
C+ ++++e++ fC+ ++ lCe C H+ H
XP_016514113.1 4 QCDVCNKNEASVFCTADEAALCEACDHRVHHVnklaskH 42
7*************************9997323555555 PP
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| 2 | zf-B_box | 30.9 | 5.6e-10 | 56 | 92 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
+ C+ ++e +++lfC++++ lC++C l++Hk Ht
XP_016514113.1 56 PLCDICQERRAILFCQQDRAILCRECDLSIHKAneHT 92
78*****************************878865 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MKIQCDVCNK NEASVFCTAD EAALCEACDH RVHHVNKLAS KHQRFSLLQP SPKQFPLCDI 60
CQERRAILFC QQDRAILCRE CDLSIHKANE HTQKHNRYLL TGIKLSANSA LYSSTLSTSA 120
ASSANFSASS LKSQNPTNKP VAASVSSTIT SNTKAAAVEA VKVVKDKVSG CNSQLVNVGG 180
NNLTSSISEY LQMLPGWHVE DFLDCSTPNG SSKIGDEDML SFWDTDLESH MSSFPPQNVG 240
VWVPQAPPPL QSKQQAQTQF LSPSNLNFGG QIGIKDSREV NSIKSSRKWR DDNSFAVPQI 300
SPPSTTFKRS RTLW
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975451 | 3e-77 | HG975451.1 Solanum pennellii chromosome ch12, complete genome. |
| Publications
? help Back to Top |
- Xu D, et al.
BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
[PMID:27325768] - Xu DB, et al.
The G-Protein β Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 in Arabidopsis.
Mol Plant, 2017. 10(9): p. 1206-1223
[PMID:28827171] - Xu D,Jiang Y,Li J,Holm M,Deng XW
The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
Plant Physiol., 2018. 176(3): p. 2365-2375
[PMID:29259103] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
Plant Physiol., 2018. 176(4): p. 2963-2976
[PMID:29439209] - Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
Plant Physiol., 2018. 177(1): p. 369-380
[PMID:29555784] - Kang X, et al.
HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
Plant Cell Environ., 2018. 41(8): p. 1912-1925
[PMID:29748960]
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