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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016512625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 134aa MW: 15672.2 Da PI: 8.7591 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.1 | 2.6e-17 | 5 | 119 | 14 | 128 |
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdL.pkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkkt 105 l+ + L++k ++++l++ + + ++i+++ P+d+ p+++++ + ke+y ++r++ y + r +++gyWk + ++l + +vg+k+ XP_016512625.1 5 LI-QQLNNKFKNQPLSI-DRLIFANINDFSPQDFfPEEINGgGMKECYVLTPRRRLYGIMPCPDRRARNGYWKLLKCiNDNILG-PDGAVGMKQK 96 44.569999999**999.5677789********9556666636679************999999999******65542777777.7778****** PP NAM 106 LvfykgrapkgektdWvmheyrl 128 L f++g+ ++g kt+W+m ey+l XP_016512625.1 97 LLFFEGKPNHGCKTQWCMIEYKL 119 *********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.842 | 1 | 134 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.9E-7 | 8 | 119 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.09E-16 | 9 | 122 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence Send to blast |
MDRFLIQQLN NKFKNQPLSI DRLIFANIND FSPQDFFPEE INGGGMKECY VLTPRRRLYG 60 IMPCPDRRAR NGYWKLLKCI NDNILGPDGA VGMKQKLLFF EGKPNHGCKT QWCMIEYKLR 120 QHCCSIDCDH NIGR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016512625.1 | 1e-96 | PREDICTED: NAC domain-containing protein 71-like, partial | ||||
TrEMBL | A0A1S4DGY1 | 3e-95 | A0A1S4DGY1_TOBAC; NAC domain-containing protein 71-like | ||||
STRING | XP_009589729.1 | 5e-85 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA17709 | 3 | 4 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 7e-16 | NAC family protein |