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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_016512531.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
G2-like |
| Protein Properties |
Length: 373aa MW: 41915.5 Da PI: 7.8672 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016512531.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.9 | 4.1e-32 | 200 | 253 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
XP_016512531.1 200 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 253
9****************************************************7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MPIEGVFVQT PSSSNPIPDL SLHISPPNSS SSPSSKPTNC LTELSLAHPT TINEEKNLFN 60
SENKTFPRNP LPHQSQNNHL LQPNSQMSNI NHGVSLLDVS SESTLTRPIK GIPIYHQNYS 120
FPNFLEKDPK RFGSLFSPYN FNGGSDHLSN AYRIPMANRF QHHHSQYGVG LGHSNETSSH 180
SFMRSRFLPK FPGKRSMRAP RMRWTTSLHA RFVHAVELLG GHERATPKSV LELMDVKDLT 240
LAHVKSHLQM YRTVKTTDKP AASSDGSSEE DLLKIDRILD QRGPSDGFDD PSTTTPTLWS 300
NSSSSRERWS QANLNEANGL RSTSFPSQQR SSHNIEECEY SRPVSYVGCS LDQRNPSLEF 360
TLGRPDWVEK EHD
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 6e-17 | 201 | 255 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional repressor that regulates lateral organ polarity. Promotes lateral organ abaxial identity by repressing the adaxial regulator ASYMMETRIC LEAVES2 (AS2) in abaxial cells. Required for abaxial identity in both leaves and carpels. Functions with KAN2 in the specification of polarity of the ovule outer integument. Regulates cambium activity by repressing the auxin efflux carrier PIN1. Plays a role in lateral root formation and development. {ECO:0000269|PubMed:11395775, ECO:0000269|PubMed:11525739, ECO:0000269|PubMed:14561401, ECO:0000269|PubMed:15286295, ECO:0000269|PubMed:16623911, ECO:0000269|PubMed:17307928, ECO:0000269|PubMed:18849474, ECO:0000269|PubMed:20179097}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by AS2 in adaxial tissue. {ECO:0000269|PubMed:18849474}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC239583 | 2e-32 | AC239583.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 5 clone C05HBa0201O22, complete sequence. |
| GenBank | HG975444 | 2e-32 | HG975444.1 Solanum pennellii chromosome ch05, complete genome. |
| GenBank | HG975517 | 2e-32 | HG975517.1 Solanum lycopersicum chromosome ch05, complete genome. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Huang T,Kerstetter RA,Irish VF
APUM23, a PUF family protein, functions in leaf development and organ polarity in Arabidopsis.
J. Exp. Bot., 2014. 65(4): p. 1181-91
[PMID:24449383] - Mach J
Getting in Shape? Leaves work it out with KANADI1.
Plant Cell, 2014. 26(1): p. 4
[PMID:24464293] - Jun SE, et al.
Comparative analysis of the conserved functions of Arabidopsis DRL1 and yeast KTI12.
Mol. Cells, 2015. 38(3): p. 243-50
[PMID:25518926] - Machida C,Nakagawa A,Kojima S,Takahashi H,Machida Y
The complex of ASYMMETRIC LEAVES (AS) proteins plays a central role in antagonistic interactions of genes for leaf polarity specification in Arabidopsis.
Wiley Interdiscip Rev Dev Biol, 2015 Nov-Dec. 4(6): p. 655-71
[PMID:26108442] - Xie Y, et al.
Meta-Analysis of Arabidopsis KANADI1 Direct Target Genes Identifies a Basic Growth-Promoting Module Acting Upstream of Hormonal Signaling Pathways.
Plant Physiol., 2015. 169(2): p. 1240-53
[PMID:26246448] - Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
Active suppression of a leaf meristem orchestrates determinate leaf growth.
Elife, 2017.
[PMID:27710768] - Singh A, et al.
Phytohormonal crosstalk modulates the expression of miR166/165s, target Class III HD-ZIPs, and KANADI genes during root growth in Arabidopsis thaliana.
Sci Rep, 2017. 7(1): p. 3408
[PMID:28611467] - Caggiano MP, et al.
Cell type boundaries organize plant development.
Elife, 2018.
[PMID:28895530] - Ó'Maoiléidigh DS,Stewart D,Zheng B,Coupland G,Wellmer F
Floral homeotic proteins modulate the genetic program for leaf development to suppress trichome formation in flowers.
Development, 2018.
[PMID:29361563]
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