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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016511910.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
B3 |
Protein Properties |
Length: 400aa MW: 44849.8 Da PI: 6.8305 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016511910.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 101 | 6.8e-32 | 47 | 151 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89
f+kv tpsdv+k++rlv+pk++ae++ ++++e++ l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ g+ +
XP_016511910.1 47 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSSNEKGLLLNFEDTNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGK 141
89****************************66677899*************************************************66699999 PP
E..EEEEE-S CS
B3 90 felvvkvfrk 99
+l++ ++r+
XP_016511910.1 142 NRLFIDWRRR 151
9999999997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MMDTPPTVNH CEGDTDEHHH SHHHNLVDLG VGATANSMAL IEREHMFDKV VTPSDVGKLN 60 RLVIPKQHAE KYFPLDSSSN EKGLLLNFED TNGKPWRFRY SYWNSSQSYV MTKGWSRFVK 120 EKKLDAGDIV SFQRGVGELG KNRLFIDWRR RPDAPTDHLH THFMTHVPLS QHFSNNFQYR 180 SNINHQYPAA WNHPLFLQPD HSPLHSRPAG SMSYQQQYSY SAYGIGNSLN YYDTTSNFNN 240 MASSRIVVNG NPCPSGSVVY LRTGSVAQVP QQEVGLMKQM QRGSSSSSIV GEGSDRLVEP 300 MVFDSVPVVQ GKAAPKRLRL FGVNMDCPVS DSDESCDMSS SSSSLPTTTY SHTPQFSTST 360 PSLQFRTFNN YDDAKPLQTA PTDEESSGKG KESMSLDLEI
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 4e-67 | 40 | 152 | 1 | 114 | B3 domain-containing transcription factor NGA1 |
5os9_B | 4e-67 | 40 | 152 | 1 | 114 | B3 domain-containing transcription factor NGA1 |
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