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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016511175.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
Whirly |
Protein Properties |
Length: 241aa MW: 26753.7 Da PI: 10.6556 |
Description |
Whirly family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016511175.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Whirly | 201.2 | 1.3e-62 | 65 | 203 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95
sv+k+kaal+ ++++ptf++ldsg +kl+r+G ++l++ ++++erkydWek+q falsatev++l+++++++sceffhdp++ +sn+G+vrk+l+
XP_016511175.1 65 SVFKGKAALSAEPRLPTFSKLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISIGTRDSCEFFHDPSMLSSNAGQVRKSLS 159
79********************************************************************************************* PP
Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
+P +dGsG+fv+lsv n+ +k+n++f+vPv+ aefav+r++++
XP_016511175.1 160 FKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFS 203
*****************************************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MAILKLIGLL RPSRNQLLHK RLPGEGVRDS IWQHAINTLA GFSTVRQNIV ADAGKLTGRV 60 FAPYSVFKGK AALSAEPRLP TFSKLDSGGV KLNRRGVIML TFWPSVGERK YDWEKRQLFA 120 LSATEVGSLI SIGTRDSCEF FHDPSMLSSN AGQVRKSLSF KPNADGSGYF VSLSVVNNNL 180 KTNDRFTVPV TTAEFAVMRT AFSFALPHIM GWDRFTNQPS ESVSQSPSKV VPQLMETEWD 240 R
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Functional Description ? help
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Source |
Description |
UniProt | Single-stranded DNA-binding protein that may be involved in the maintenance of mitochondrial genome stability by preventing break-induced DNA rearrangements. {ECO:0000269|PubMed:21911368}. |