 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_016511122.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bHLH |
| Protein Properties |
Length: 355aa MW: 40732.5 Da PI: 9.7118 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016511122.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 40.2 | 6.2e-13 | 66 | 118 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
++ +hn+ Er+RR+++N +++Lr+llP a + ++kKls +++ + eYI +L
XP_016511122.1 66 KKLSHNASERNRRKKMNFLYSTLRSLLPAA-NHQKKKLSFPATVSYVQEYIPEL 118
6789*************************7.578888**************888 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MLVFSSCIFP NMNTEWSFEE PQNYDQQNNI LQNEITNDSF EGLHIDNIQY SYSKEKSFDN 60
QSLMAKKLSH NASERNRRKK MNFLYSTLRS LLPAANHQKK KLSFPATVSY VQEYIPELKK 120
EIERLSQTKD LLLSTILSKK ADSLVQPNNY NNKRNTTSSA SSTSIFASPL CNGQVLVHIS 180
TTQTNGFPIS EAFQTLEEDG ILLLNATSFK SFGDKIFHSL HFQGAAFGLL RLAARRLYCS 240
PTTPFSRFRQ LPFRPPLLRE SLLLSFPLAT KIFQFAWFSL ACPWIQQQFE RLPYSGISGS 300
MLIXLPFRSP LLRESLLLSF PLATKMFQFA WFSLACPWIQ QQFERLPYSG IMISG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BA000042 | 1e-132 | BA000042.1 Nicotiana tabacum mitochondrial DNA, complete genome. |
| GenBank | KJ865409 | 1e-132 | KJ865409.1 Capsicum annuum cultivar CMS line FS4401 mitochondrion, complete genome. |
| GenBank | KJ865410 | 1e-132 | KJ865410.1 Capsicum annuum cultivar Jeju mitochondrion, complete genome. |
| GenBank | KR071121 | 1e-132 | KR071121.1 UNVERIFIED: Nicotiana tabacum strain ms zhongyan100 mitochondrion sequence. |
| GenBank | KR780036 | 1e-132 | KR780036.1 Nicotiana tabacum cultivar zhongyan 100 mitochondrion, complete genome. |
| GenBank | KT997964 | 1e-132 | KT997964.1 Nicotiana sylvestris cultivar TW 137 mitochondrion, complete genome. |
