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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_016507921.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family |
DBB |
| Protein Properties |
Length: 296aa MW: 32118.2 Da PI: 5.1539 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016507921.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 20.8 | 8.1e-07 | 4 | 47 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
C+ +e+ e++ C ++ lC +C ++ H H++vpl
XP_016507921.1 4 QCNVCESAEARVLCCADEAALCWSCDDKVHAAnklaskHQRVPL 47
7*****************************66899999999986 PP
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| 2 | zf-B_box | 28.9 | 2.4e-09 | 53 | 94 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
++kC+ ++e +fC +++ llC++C ++H H
XP_016507921.1 53 PMPKCDICQETVGYFFCLEDRALLCRKCDIYIHTAnayvsaH 94
689********9*********************555566666 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MKIQCNVCES AEARVLCCAD EAALCWSCDD KVHAANKLAS KHQRVPLSAS SSPMPKCDIC 60
QETVGYFFCL EDRALLCRKC DIYIHTANAY VSAHQRFLLT GVKVGLEPIN PAASASSGKS 120
HSVQKVLEPE SPPISKRTAP MSSNAPCNDV LPVQASGVED FARSSLSLVG GSTAGIIPQW 180
QFDEFLGMGD FNQNYGYMDY GSSKADSGKV GESDSSPILR DAEVEGDKCF SEVPETCWAV 240
PQIPSPPTAS GLYWPTKTLQ NPFDCAVFES DVSYSPLQNF QLQQSNGSGF KRRRAF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as positive regulator of seedling photomorphogenesis and light-regulated inhibition of hypocotyl elongation, independently and in concert with HY5 and BBX21 (PubMed:18540109, PubMed:18796637, PubMed:18182030, PubMed:21427283). Acts as a positive regulator of de-etiolation and influences chloroplast biogenesis and function through regulation of genes encoding chloroplast proteins (PubMed:18182030). Acts downstream of COP1 and plays an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). Regulates the expression of genes responsive to light hormone signals which may contribute to optimal seedling development (PubMed:21427283). {ECO:0000269|PubMed:18182030, ECO:0000269|PubMed:18540109, ECO:0000269|PubMed:18796637, ECO:0000269|PubMed:21070414, ECO:0000269|PubMed:21427283}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By light. {ECO:0000269|PubMed:18182030}. |
