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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_016507743.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
Trihelix |
| Protein Properties |
Length: 430aa MW: 49269.1 Da PI: 8.2177 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016507743.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 94.7 | 8.8e-30 | 100 | 185 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ ++++yf+qlea
XP_016507743.1 100 RWPRQETLTLLEVRSQLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRYFRQLEA 185
8*************************************999*****************************98..55667*******85 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 430 aa
Download sequence Send
to blast |
MDDHEYGMMD LTQYINGRPI FASNIPPHLH SDLLCSHQHY EMVMATVPQH NCVPHPTAAA 60
TARPSVSGGG GGATLSTASE MEGCGGGGVM RGGGDGGNGR WPRQETLTLL EVRSQLDSKF 120
KEANQKGPLW DEVSRIMSEE HGYQRSGKKC REKFENLYKY YKKTKEGKAG RQDGKHYRYF 180
RQLEALYGKT SNTISISETN NIGSSNFHYN NPINNNNQES HNFHHQGHKF SDSLISLSDS 240
SDSDHATSFD DSELNMDNDS KEKRKKKRGK RSWKGKIKDF VDIQMKKLIE KQEAWLEKMM 300
KTIEHKEQER ILREEEWKKQ ESIRIEKEQK FWAGERVWIE ARDAALIDAL HKLNGDQELI 360
KVNKNASICK DMNWDGINGY LIKCNKKQKE NCLSSYYNFK NNEEGRSYCE TSRHVPNVQI 420
MDPGMFQVSG
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| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 262 | 270 | KRKKKRGKR |
| 2 | 263 | 270 | RKKKRGKR |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that prevents growth. Regulates perianth architecture in flower, mostly in the second whorl, probably by suppressing growth between initiating sepals, ensuring that they remain separate, and by modulating organ shapes. Required for the establishment of auxin flux. {ECO:0000269|PubMed:10572040, ECO:0000269|PubMed:15269176, ECO:0000269|PubMed:18080804}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Expression within the newly arising sepals is repressed via the PINOID auxin-response pathway. {ECO:0000269|PubMed:15269176}. |
