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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016506326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 149aa MW: 17592.9 Da PI: 4.4841 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 83.5 | 4.2e-26 | 13 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkev 92 ppG+rF Ptdeelv++yL++kv+ +++++ + i+ + y+ P+ L +++ + ewyfF+++d+ + + k + + g W+ gk+ ++ XP_016506326.1 13 PPGYRFVPTDEELVKYYLENKVHYQPFPALFIedIHAKEFYSKSPEALVENM-CSAGEWYFFIHQDEYFRGKIGKFQivGNEIGLWQCFGKEFPI 106 9*************************7774323488889*********8544.3567*******9986654443433123568************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g +vg k L + + ++++k +W+m+ yrl XP_016506326.1 107 YNSEGDVVGFKVNLKYCS---RSAKKNTWIMEKYRL 139 ****************94...444589*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.96E-28 | 10 | 142 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.122 | 12 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-17 | 13 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MATENDDLIT EFPPGYRFVP TDEELVKYYL ENKVHYQPFP ALFIEDIHAK EFYSKSPEAL 60 VENMCSAGEW YFFIHQDEYF RGKIGKFQIV GNEIGLWQCF GKEFPIYNSE GDVVGFKVNL 120 KYCSRSAKKN TWIMEKYRLS FECAIDDEE |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-14 | 12 | 139 | 15 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016506326.1 | 1e-108 | PREDICTED: NAC domain-containing protein 101-like, partial | ||||
TrEMBL | A0A1S4CYX3 | 1e-107 | A0A1S4CYX3_TOBAC; NAC domain-containing protein 101-like | ||||
STRING | PGSC0003DMT400041310 | 1e-58 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA16166 | 6 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 6e-22 | NAC-domain protein 101 |