PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016506202.1 | ||||||||
Common Name | NAC8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 34959.7 Da PI: 4.828 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 75.3 | 1.5e-23 | 45 | 165 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 +F+P+d +l+++ L k v+gk l++e i +d+y++ePw+L ++ ++k yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++ XP_016506202.1 45 QFRPSDTDLIMQ-LLKFVAGKCLPTEGLIVFADVYSIEPWQLIGDMS-SKKTHYFLTQLKKKKPTDARFNRTTCNGTWTQQNKGKKILDEdESLI 137 7*********77.667899999999899**************86664.4677899999*******************************845556 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g k++L++ ++ ++ + +W+m ey l XP_016506202.1 138 IGYKRSLTYK-HKKDSSFNGRWLMMEYFL 165 9*******98.5666668*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 26.708 | 40 | 189 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.05E-23 | 45 | 188 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-10 | 45 | 164 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MFFLVLFHSQ SRKFFVSFSL ILESFLCHCF QSLQERTEPM EKNPQFRPSD TDLIMQLLKF 60 VAGKCLPTEG LIVFADVYSI EPWQLIGDMS SKKTHYFLTQ LKKKKPTDAR FNRTTCNGTW 120 TQQNKGKKIL DEDESLIIGY KRSLTYKHKK DSSFNGRWLM MEYFLADSLL QELKSNEAEE 180 FVICAIKKNP RSEIRGNSVA SVVEYKRFID RFLQEQSTMI LSDNSPVRLE STSSDVFSMG 240 QLQSKDGVLV IINQTDSDEF FGMVNVENQE CYYQEGDEEE VDWESILDFG DHGSVQNDLL 300 Y |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU753265 | 0.0 | EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016506197.1 | 0.0 | PREDICTED: uncharacterized protein LOC107823995 | ||||
Refseq | XP_016506198.1 | 0.0 | PREDICTED: uncharacterized protein LOC107823995 | ||||
Refseq | XP_016506200.1 | 0.0 | PREDICTED: uncharacterized protein LOC107823995 | ||||
Refseq | XP_016506201.1 | 0.0 | PREDICTED: uncharacterized protein LOC107823995 | ||||
Refseq | XP_016506202.1 | 0.0 | PREDICTED: uncharacterized protein LOC107823995 | ||||
TrEMBL | A0A1S4CYI5 | 0.0 | A0A1S4CYI5_TOBAC; uncharacterized protein LOC107823995 | ||||
STRING | XP_009628603.1 | 0.0 | (Nicotiana tomentosiformis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 6e-15 | NAC-like, activated by AP3/PI |