PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016506200.1
Common NameNAC8
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 301aa    MW: 34959.7 Da    PI: 4.828
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016506200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM75.31.5e-23451656128
             NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                     +F+P+d +l+++ L k v+gk l++e  i  +d+y++ePw+L   ++ ++k  yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++  
  XP_016506200.1  45 QFRPSDTDLIMQ-LLKFVAGKCLPTEGLIVFADVYSIEPWQLIGDMS-SKKTHYFLTQLKKKKPTDARFNRTTCNGTWTQQNKGKKILDEdESLI 137
                     7*********77.667899999999899**************86664.4677899999*******************************845556 PP

             NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                     +g k++L++   ++ ++ + +W+m ey l
  XP_016506200.1 138 IGYKRSLTYK-HKKDSSFNGRWLMMEYFL 165
                     9*******98.5666668*********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.70840189IPR003441NAC domain
SuperFamilySSF1019411.05E-2345188IPR003441NAC domain
PfamPF023651.2E-1045164IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MFFLVLFHSQ SRKFFVSFSL ILESFLCHCF QSLQERTEPM EKNPQFRPSD TDLIMQLLKF  60
VAGKCLPTEG LIVFADVYSI EPWQLIGDMS SKKTHYFLTQ LKKKKPTDAR FNRTTCNGTW  120
TQQNKGKKIL DEDESLIIGY KRSLTYKHKK DSSFNGRWLM MEYFLADSLL QELKSNEAEE  180
FVICAIKKNP RSEIRGNSVA SVVEYKRFID RFLQEQSTMI LSDNSPVRLE STSSDVFSMG  240
QLQSKDGVLV IINQTDSDEF FGMVNVENQE CYYQEGDEEE VDWESILDFG DHGSVQNDLL  300
Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532650.0EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016506197.10.0PREDICTED: uncharacterized protein LOC107823995
RefseqXP_016506198.10.0PREDICTED: uncharacterized protein LOC107823995
RefseqXP_016506200.10.0PREDICTED: uncharacterized protein LOC107823995
RefseqXP_016506201.10.0PREDICTED: uncharacterized protein LOC107823995
RefseqXP_016506202.10.0PREDICTED: uncharacterized protein LOC107823995
TrEMBLA0A1S4CYI50.0A0A1S4CYI5_TOBAC; uncharacterized protein LOC107823995
STRINGXP_009628603.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-15NAC-like, activated by AP3/PI