PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016505247.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 266aa    MW: 30908.8 Da    PI: 6.4189
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016505247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.94.2e-19191583128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 
                      GfrF+Ptd+e +  +L + v+g++++ + +  +++d+y k ePw++  +   + + e+++ y ++ ++ k++++ r +r + ++g+Wk+  kdk
  XP_016505247.1  19 EGFRFRPTDSEGL-TFLLRFVAGQEMHDAGFiTTNIDVYgKQEPWEIYdNgvpCGDDEDNSSYCYFITKLKKKSNARYHRsVRNKGTWKQDAKDK 112
                     7**********99.8899999999988878735566*99456*****7445553334555555444444444456777775778*********** PP

             NAM  91 evlsk......kgelvglkktLvfykg..rapkgektdWvmheyrl 128
                     +v+ k      +  ++g k+ L + ++    ++ +  +W m+ey+l
  XP_016505247.1 113 PVHYKtmgntsSVVNIGSKTCLSYKNKmfYPEDQRDGHWPMKEYEL 158
                     ***99776544334499*****9995543455666789******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.15E-1715179IPR003441NAC domain
PROSITE profilePS5100521.37917181IPR003441NAC domain
PfamPF023653.4E-1219158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MAMQQWQTQL KRASRWFEEG FRFRPTDSEG LTFLLRFVAG QEMHDAGFIT TNIDVYGKQE  60
PWEIYDNGVP CGDDEDNSSY CYFITKLKKK SNARYHRSVR NKGTWKQDAK DKPVHYKTMG  120
NTSSVVNIGS KTCLSYKNKM FYPEDQRDGH WPMKEYELSK VILHKLDEDR RDYVLCAIKK  180
LKHVNSSSET STTTMLNFDQ SVLPDMYSNS AHVVYSEVAD HMTYMSQINS KKVPEDVLGL  240
DLWDIMNSDE LHRILEDVSE CCPNGC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016505247.10.0PREDICTED: NAC domain-containing protein 37-like
TrEMBLA0A1S4CVJ10.0A0A1S4CVJ1_TOBAC; NAC domain-containing protein 37-like
STRINGXP_009795944.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-10NAC domain containing protein 2