 |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016503569.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
Family |
LBD |
Protein Properties |
Length: 189aa MW: 21277.5 Da PI: 6.295 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016503569.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 117.9 | 6.1e-37 | 15 | 112 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94
+C+aCk+lrr+C++dC++ p+fp ++p+kf +vh++FGasn++k+l++ p ++reda+ s+vyeA ar+rdPvyG+vg+i+++q+++ +l++el
XP_016503569.1 15 PCSACKFLRRRCTQDCIFLPHFPTAEPQKFIAVHRIFGASNISKILQQEiPVDNREDAVISMVYEATARLRDPVYGCVGIISAVQKHVFHLQSEL 109
7*********************************************87648888****************************************9 PP
DUF260 95 all 97
+++
XP_016503569.1 110 NEA 112
986 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MFFMGSTNKK NKHMPCSACK FLRRRCTQDC IFLPHFPTAE PQKFIAVHRI FGASNISKIL 60 QQEIPVDNRE DAVISMVYEA TARLRDPVYG CVGIISAVQK HVFHLQSELN EALAEAMFLR 120 TQLSDALSLP SLIEGSPFTP ENHEFLHFQK PSEQNAYANA SDALLLLPEA ADHYCLQGTE 180 VLPLPYLDI
|
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975445 | 1e-87 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |