PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016501212.1
Organism
Nicotiana tabacum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 139aa    MW: 15938.8 Da    PI: 8.6206
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016501212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.61.1e-1481293112
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk....kvkaeekewy.fFskrdkkyatgkrknratksgyWkatgkdk 90 
                      GfrF+Ptd+e +  +L + ++g+++  + +  ++vd+y k ePw++ +    + + e+++ y +F+++ kk+++ + +  + ++g+Wk+  k k
  XP_016501212.1   8 EGFRFRPTDSEGL-TFLLRFIAGQEMYDAGFiTTNVDVYgKQEPWEIYEhgvpCGDDEDNSSYrYFITKLKKKSNARYHPSVGNKGTWKQDNKGK 101
                     6**********99.7888999999966657636677*99456*****7335553333444443255556666666666666889*********** PP

             NAM  91 evlsk......kgel..vglkktLvfykgr 112
                     +v+ k      +  +  +g k++L + +++
  XP_016501212.1 102 PVHYKnmgnssS--VvnIGSKTSLCYKNKK 129
                     ***986654433..156999*999998554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.98E-125128IPR003441NAC domain
PROSITE profilePS5100514.1596139IPR003441NAC domain
PfamPF023659.3E-98127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MEHLNPEEGF RFRPTDSEGL TFLLRFIAGQ EMYDAGFITT NVDVYGKQEP WEIYEHGVPC  60
GDDEDNSSYR YFITKLKKKS NARYHPSVGN KGTWKQDNKG KPVHYKNMGN SSSVVNIGSK  120
TSLCYKNKKF YPGDQKDGH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016501212.11e-102PREDICTED: NAC domain-containing protein 7-like
TrEMBLA0A1S4CJ251e-100A0A1S4CJ25_TOBAC; NAC domain-containing protein 7-like
STRINGXP_009774958.17e-90(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.11e-07NAC domain containing protein 86