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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
XP_016495337.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
LBD |
| Protein Properties |
Length: 298aa MW: 32222.3 Da PI: 6.605 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016495337.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.9 | 5.1e-31 | 4 | 106 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90
+C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a p++ r+++++sl+yeA+ r+ +P+yG+vg+++++++ql+q
XP_016495337.1 4 SCNGCRVLRKGCSESCSIRPCLqwiktPESQSNATVFLAKFYGRAGLMNLINAGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWQLCQN 98
6********************************************************************************************** PP
DUF260 91 kaelallk 98
++e++l +
XP_016495337.1 99 AVEAVLKG 106
**998876 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSESCS IRPCLQWIKT PESQSNATVF LAKFYGRAGL MNLINAGPDH 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GNWQLCQNAV EAVLKGAPVT PIASEVAVNN 120
NGPPLKLPYD IRHINKDDNA IKSNDLHRVR TRCRLKRSAT NTKATKANPV CSGSGDESAL 180
EKVNGSTSHD SSLSHQSEAA AVSAPNAQCE SREIESLQSA EMAEAEDSTA VEPASVSQVD 240
DRAEDGEIEL ELTLGFAPFA TSHGKPKDTK RSEAVHLLDA AGECKMELGL TFRCDQFC
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