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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_016493993.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
|
| Family |
bHLH |
| Protein Properties |
Length: 176aa MW: 20146.3 Da PI: 9.5468 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_016493993.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 27.8 | 4.6e-09 | 19 | 64 | 4 | 52 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
++ rE+ RRdr+N++f eL ++l + + +K +K++iL A + +
XP_016493993.1 19 SKASREKLRRDRLNERFLELSSVLDPG---RPPKTEKVAILSDAQKMLI 64
6778**********************8...88**********9988765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 176 aa
Download sequence Send
to blast |
MCFNFIYRSR IECCSSPRSK ASREKLRRDR LNERFLELSS VLDPGRPPKT EKVAILSDAQ 60
KMLIELRTET QKLKESNEEL QEKIKELKAE KIELRDEKQR LKEEKENLEQ QVKTLASKPG 120
FLSHPSAMGA AFTAQGQVAG NKLMPFIGYP SVAMWQFMQP AVVDTSQDHV LRPPVA
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975446 | 1e-115 | HG975446.1 Solanum pennellii chromosome ch07, complete genome. |
| Publications
? help Back to Top |
- Li X,Zhang H,Ai Q,Liang G,Yu D
Two bHLH Transcription Factors, bHLH34 and bHLH104, Regulate Iron Homeostasis in Arabidopsis thaliana.
Plant Physiol., 2016. 170(4): p. 2478-93
[PMID:26921305] - Aparicio F,Pallás V
The coat protein of Alfalfa mosaic virus interacts and interferes with the transcriptional activity of the bHLH transcription factor ILR3 promoting salicylic acid-dependent defence signalling response.
Mol. Plant Pathol., 2017. 18(2): p. 173-186
[PMID:26929142] - Liang G,Zhang H,Li X,Ai Q,Yu D
bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana.
J. Exp. Bot., 2017. 68(7): p. 1743-1755
[PMID:28369511] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis.
Plant Physiol., 2017. 175(2): p. 628-640
[PMID:28864470] - Li B, et al.
Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
Plant Cell, 2018. 30(1): p. 178-195
[PMID:29317470] - Min JH, et al.
Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
Front Plant Sci, 2017. 8: p. 2100
[PMID:29321786] - Samira R, et al.
The bHLH transcription factor ILR3 modulates multiple stress responses in Arabidopsis.
Plant Mol. Biol., 2018. 97(4-5): p. 297-309
[PMID:29882068]
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