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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_016491803.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family |
LBD |
Protein Properties |
Length: 378aa MW: 40761.3 Da PI: 5.9021 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_016491803.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 36.2 | 1.7e-11 | 13 | 89 | 10 | 85 |
DUF260 10 rkCakd.CvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqq 85
+C+k+ Cv+ f + +f +++k++G++ ++l+++ p+e++ +a+++++ eA++r+rdPv Ga++ + l+
XP_016491803.1 13 MECKKEwCVFQ-FFSPFDIPDFLAIKKIYGTKAFGRMLSRVvPDERKAEAIRCITEEARCRIRDPVGGAFREMELLKM 89
38999978875.678888899******************9945666899**********************9988875 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006633 | Biological Process | fatty acid biosynthetic process |
GO:0055114 | Biological Process | oxidation-reduction process |
GO:0004316 | Molecular Function | 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity |
GO:0051287 | Molecular Function | NAD binding |
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MACPLHIFLG KEMECKKEWC VFQFFSPFDI PDFLAIKKIY GTKAFGRMLS RVVPDERKAE 60 AIRCITEEAR CRIRDPVGGA FREMELLKMA KPTSTHSSVN SYHQELILGA GFTERIGVRA 120 PVETTEQAGV DAAAKVEGPV VIVTEASRGI GKAIALALGK AGCKVLVNYA ISSKDAEEVS 180 KEIEACGGEA FTFVGNVSKQ EDVESMIKTV VGRWGTVDIL INNAGVTRDT LLMRMNQSQW 240 QEVIEFSLTG VFLCTQAAAK IMMKKKKGRI INISPVVGLV GNAGQDTAKA GVIGLTKSVA 300 KEYASWNITV NVVAPGFIAS DMSAKLSEDI EEEISQSVPL GRCGQPEEVA GLVEFLALNP 360 AASYITGQVL NIDGGMVM
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1edo_A | 1e-121 | 139 | 378 | 2 | 244 | BETA-KETO ACYL CARRIER PROTEIN REDUCTASE |
2cdh_G | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
2cdh_H | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
2cdh_I | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
2cdh_J | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
2cdh_K | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
2cdh_L | 1e-121 | 139 | 378 | 2 | 244 | KETOACYL REDUCTASE |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT014205 | 0.0 | BT014205.1 Lycopersicon esculentum clone 133382F, mRNA sequence. |
GenBank | EU616561 | 0.0 | EU616561.1 Capsicum annuum putative 3-oxoacyl-(acyl-carrier protein) reductase mRNA, complete cds. |