PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 456aa MW: 51085.6 Da PI: 6.94

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_016487615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	114.7	9.3e-36	50	193	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79 lp+G++F+Ptd+el+ e+L++kv +kk + + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++ XP_016487615.1 50 LPAGVKFDPTDQELI-EHLEAKVVSKKeskshplI---DefipTIEGEdGICYTHPEKLP-GVTKDGLSRHFFHRPSKAYTTGTRKRRKIQtecd 139 799**********.9999999888856665443...143334766646******.555667799**************7333455 PP NAM 80 ....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_016487615.1 140 lqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 193 5544778********.999*******5547999999*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51257	5	1	16	No hit	No description
SuperFamily	SSF101941	4.05E-39	46	212	IPR003441	NAC domain
PROSITE profile	PS51005	33.55	50	212	IPR003441	NAC domain
Pfam	PF02365	5.2E-16	51	193	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence Send to blast
MNKSSSSHQL GSISSCDLID AKLEEHQLCG SKQCPGCGQK LDGKPDWVGL PAGVKFDPTD 60 QELIEHLEAK VVSKKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTKD GLSRHFFHRP 120 SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK 180 PEKTNWVMHQ YHLGQNEEER EGELVVSKIF YQTQPRQCNT TTWSNNERSI NTGDHSGSGS 240 CSSSKEINNI NPNSHSHRDE LSAVAVGVAM SSNYNTFNIQ QLKADHFSFL PFRKNFDEAG 300 IMDADASMAS EAAAPAGTCE EPESQRQHPH HVTNEPSHQH HHHHQNQIAT SAAFNISRPS 360 PPLSAIIAPP PPLHHTSVIL DHDSFHVPRN YNFQQQQQQQ HHKLGARSAS GLEELIMGCT 420 SSTDIKEESS LTNPQEADWL KYSSFWPDPE NTDHHE

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence Send to blast

MNKSSSSHQL GSISSCDLID AKLEEHQLCG SKQCPGCGQK LDGKPDWVGL PAGVKFDPTD  60
QELIEHLEAK VVSKKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTKD GLSRHFFHRP  120
SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK  180
PEKTNWVMHQ YHLGQNEEER EGELVVSKIF YQTQPRQCNT TTWSNNERSI NTGDHSGSGS  240
CSSSKEINNI NPNSHSHRDE LSAVAVGVAM SSNYNTFNIQ QLKADHFSFL PFRKNFDEAG  300
IMDADASMAS EAAAPAGTCE EPESQRQHPH HVTNEPSHQH HHHHQNQIAT SAAFNISRPS  360
PPLSAIIAPP PPLHHTSVIL DHDSFHVPRN YNFQQQQQQQ HHKLGARSAS GLEELIMGCT  420
SSTDIKEESS LTNPQEADWL KYSSFWPDPE NTDHHE

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269\|PubMed:25265867, ECO:0000269\|PubMed:25535195}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016487615.1	0.0	PREDICTED: NAC domain-containing protein 82-like isoform X1
Refseq	XP_016487616.1	0.0	PREDICTED: NAC domain-containing protein 82-like isoform X1
Swissprot	Q9M0F8	1e-177	NAC75_ARATH; NAC domain-containing protein 75
TrEMBL	A0A1S4BFE1	0.0	A0A1S4BFE1_TOBAC; NAC domain-containing protein 82-like isoform X1
STRING	XP_009789697.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4057	24	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-159	NAC domain containing protein 75

Publications ? help Back to Top
Droc G, et al. OryGenesDB: a database for rice reverse genetics. Nucleic Acids Res., 2006. 34(Database issue): p. D736-40 [PMID:16381969] Sakamoto S,Mitsuda N Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant. Plant Cell Physiol., 2015. 56(2): p. 299-310 [PMID:25535195]