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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016484151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Family | BES1 | ||||||||
Protein Properties | Length: 707aa MW: 78839.4 Da PI: 5.4145 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 140.8 | 1.3e-43 | 70 | 216 | 1 | 137 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 ggs+r ++ +E+E++k+RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ s+ + + +++g+ +++ ++ss++ XP_016484151.1 70 GGSRRCRPLEEKERTKLRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSHSQVTGATGGTPTTMVTSSSSH 164 6899*****************************************************************95555554455555544444444433 PP DUF822 96 ..........sslkssalaspvesysaspksssfpspssldsislasaasll 137 ++ + s ++ ++++++++ks+ +p +s +ds s+a ++++ XP_016484151.1 165 iptqhtppasLKGTPSGFQNTANHSACQMKSVFIPTSSPYDSSSTARSQTSA 216 2110000103344557888889999999999999999999999887654443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.8E-37 | 71 | 209 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
SuperFamily | SSF51445 | 3.66E-181 | 253 | 695 | IPR017853 | Glycoside hydrolase superfamily |
Gene3D | G3DSA:3.20.20.80 | 1.5E-197 | 256 | 699 | IPR013781 | Glycoside hydrolase, catalytic domain |
Pfam | PF01373 | 5.2E-107 | 262 | 682 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 293 | 307 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 314 | 332 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 336 | 357 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 2.7E-8 | 419 | 428 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 6.2E-70 | 429 | 451 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 502 | 521 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 536 | 552 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 553 | 564 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00750 | 6.2E-70 | 571 | 594 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 2.7E-8 | 574 | 584 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00750 | 6.2E-70 | 611 | 633 | IPR001554 | Glycoside hydrolase, family 14 |
PRINTS | PR00842 | 2.7E-8 | 662 | 676 | IPR001371 | Glycoside hydrolase, family 14B, plant |
PRINTS | PR00842 | 2.7E-8 | 677 | 691 | IPR001371 | Glycoside hydrolase, family 14B, plant |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000272 | Biological Process | polysaccharide catabolic process | ||||
GO:0048831 | Biological Process | regulation of shoot system development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0016161 | Molecular Function | beta-amylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence Send to blast |
MASEMQRYVT NEDDEEMDVK EEDDEDEDED DEDKNGTMPA MAGFDGAHGS SSSNMFQHHQ 60 QYQEPPTPCG GSRRCRPLEE KERTKLRERQ RRAITAKILA GLRRHGNYNL RVRADINDVI 120 AALAREAGWV VLPDGTTFPS KSHSQVTGAT GGTPTTMVTS SSSHIPTQHT PPASLKGTPS 180 GFQNTANHSA CQMKSVFIPT SSPYDSSSTA RSQTSAMVAD GQDTQNDPFL VGSGDSIDKQ 240 VIDIHTKLQE RDFAGTPYIP VYVMLPLGVI NMKSELVDAD GLVKQLRVLK STNVDGVMVD 300 CWWGIVEANA PQDYNWNGYK RLFQVVREHK LKIKVVMSFH ECGGNIGDDV CIPLPHWVSE 360 IGRSNPDIYF TDRAGRRNPE CLSWGIDKER VLKGRTAVEV YFDYMRSFRV EFDEFFEDGI 420 ISMVEVGLGP CGELRYPSNP VKHGWRYPGV GEFQCYDQYL LKGLRKAAEA RGHSFWARGP 480 DNAGSYNSQP QETGFFCDGG DYDGYYGRFF LNWYSQVLVD HADRVLSLAK LAFDGTCIAA 540 KLSGIHWWYK TSSHAAELTA GFYNPSNRDG YVAIAAMLKK HGAALNFKCA EMSMLEQAVD 600 FSEALGDPEG LAWQVLNAAW DVSLPVCSEN ALLCHDRGGY NCLLEKAKLL NDPDGKHIFA 660 FTYLRLGPLL IDGQNFMEFE RFVKRMHGEA VLESTVVRES RQSSLCA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1bya_A | 1e-149 | 258 | 689 | 11 | 444 | BETA-AMYLASE |
1byb_A | 1e-149 | 258 | 689 | 11 | 444 | BETA-AMYLASE |
1byc_A | 1e-149 | 258 | 689 | 11 | 444 | BETA-AMYLASE |
1byd_A | 1e-149 | 258 | 689 | 11 | 444 | BETA-AMYLASE |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AJ718373 | 0.0 | AJ718373.1 Nicotiana tabacum cDNA-AFLP-fragment BSTT43-4-510, cultivar Bright Yellow 2. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009632039.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Refseq | XP_009632041.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Refseq | XP_016484151.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Refseq | XP_016484152.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Refseq | XP_018622260.1 | 0.0 | PREDICTED: beta-amylase 7-like isoform X1 | ||||
Swissprot | O80831 | 0.0 | BAM7_ARATH; Beta-amylase 7 | ||||
TrEMBL | A0A1S4B5J7 | 0.0 | A0A1S4B5J7_TOBAC; Beta-amylase | ||||
STRING | XP_009632039.1 | 0.0 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1607 | 24 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 0.0 | beta-amylase 7 |
Publications ? help Back to Top | |||
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